# Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/t-coffee/t-coffee-2.50.ebuild,v 1.2 2005/08/07 14:55:45 ribosome Exp $ inherit toolchain-funcs DESCRIPTION="A multiple sequence alignment package" HOMEPAGE="http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html" SRC_URI="http://igs-server.cnrs-mrs.fr/~cnotred/Packages/T-COFFEE_distribution_Version_${PV}.tar.gz" LICENSE="t-coffee" RESTRICT="nomirror" SLOT="0" IUSE="" KEYWORDS="x86" DEPEND="sci-biology/clustalw" TCDIR="${WORKDIR}/T-COFFEE_distribution_Version_${PV}" S=${TCDIR}/t_coffee_source src_unpack(){ unpack ${A} cd ${S} sed -i -e "s/CC = cc/CC = $(tc-getCC) ${CFLAGS}/" makefile || die || die cd ${TCDIR}/bin sed -i -e 's%chdir "./example/test";%chdir "../example/test";%' test.pl || die } src_compile() { make all || die } src_install() { cd ${TCDIR}/bin dobin t_coffee insinto /usr/share/${PN}/lib doins ${TCDIR}/html dodoc ${TCDIR}/doc/README4T-COFFEE insinto /usr/share/doc/${PF} doins ${TCDIR}/doc/t_coffee{_doc.{doc,pdf},.pdf} doins ${TCDIR}/doc/*.txt insinto /usr/share/${PN}/example doins ${TCDIR}/example/* } src_test() { cd ${TCDIR}/bin ./test.pl || die }