sys-cluster/slurm: Version bump (v19.05.3.2)

Package-Manager: Portage-2.3.76, Repoman-2.3.16
Signed-off-by: Mikle Kolyada <zlogene@gentoo.org>

3 files changed, 273 insertions, 0 deletions

diff --git a/sys-cluster/slurm/Manifest b/sys-cluster/slurm/Manifest
index d61e5c594221..1ec305f1dbd7 100644
--- a/sys-cluster/slurm/Manifest
+++ b/sys-cluster/slurm/Manifest
@@ -1 +1,2 @@
 DIST slurm-18.08.7.tar.bz2 6186006 BLAKE2B a5458f72cbe93bc1103c2c7f3d428ae14239cb092edad2c683e448dda35f3e108fef0d9a3a86599da6058c9c98a86dafed9a087ffe6e8d7425db9cdb879954b3 SHA512 d0047086f1b716877cc5bb39539bf96a8fd08b1851c85fd85112c6432c1ce2a0f29fc9dd8803094c8fa44d063cec5f417e6bed231b6d338934ff4b48424a5a93
+DIST slurm-19.05.3-2.tar.bz2 6233270 BLAKE2B be59d157e99353340f9801f0adac21cfb8c3051f8d6a1bd94ad76fc05d0f83d1f933f72bf4e33b603521ec94cc859185bf56ecbcab674fcbff526164dd39d3cc SHA512 15d63f1ba693458b220ece5512210f1dba52273946809b338e33d684b9daadecd3cc77fda84c1b3bf8b03bc0fe8b8be0f429a96a1bf72a8b5c8cf169e0e1f5bb
diff --git a/sys-cluster/slurm/metadata.xml b/sys-cluster/slurm/metadata.xml
index c588bb7a9527..f4298bcbe29f 100644
--- a/sys-cluster/slurm/metadata.xml
+++ b/sys-cluster/slurm/metadata.xml
@@ -24,5 +24,6 @@
 		<flag name="ofed">Add Infiniband support via ofed</flag>
 		<flag name="slurmdbd">Install SQL server for slurmdbd</flag>
 		<flag name="torque">Enable perl scripts that emulates pbs (qstat, qsub etc.)</flag>
+		<flag name="ucx">Enable Unified Communication X library support</flag>
 	</use>
 </pkgmetadata>
diff --git a/sys-cluster/slurm/slurm-19.05.3.2.ebuild b/sys-cluster/slurm/slurm-19.05.3.2.ebuild
new file mode 100644
index 000000000000..58a1775accb1
--- /dev/null
+++ b/sys-cluster/slurm/slurm-19.05.3.2.ebuild
@@ -0,0 +1,271 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+if [[ ${PV} == *9999* ]]; then
+	EGIT_REPO_URI="https://github.com/SchedMD/slurm.git"
+	INHERIT_GIT="git-r3"
+	SRC_URI=""
+	KEYWORDS=""
+	MY_P="${P}"
+else
+	if [[ ${PV} == *pre* || ${PV} == *rc* ]]; then
+		MY_PV=$(ver_rs '-0.') # pre-releases or release-candidate
+	else
+		MY_PV=$(ver_rs 3 '-') # stable releases
+	fi
+	MY_P="${PN}-${MY_PV}"
+	INHERIT_GIT=""
+	SRC_URI="https://download.schedmd.com/slurm/${MY_P}.tar.bz2"
+	KEYWORDS="~amd64 ~x86"
+fi
+
+inherit autotools bash-completion-r1 pam perl-module prefix toolchain-funcs systemd ${INHERIT_GIT}
+
+DESCRIPTION="A Highly Scalable Resource Manager"
+HOMEPAGE="https://www.schedmd.com"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE="debug hdf5 html ipmi json lua multiple-slurmd +munge mysql netloc numa ofed pam perl slurmdbd ssl static-libs ucx torque X"
+
+COMMON_DEPEND="
+	!sys-cluster/torque
+	!net-analyzer/slurm
+	!net-analyzer/sinfo
+	|| ( sys-cluster/pmix[-pmi] >=sys-cluster/openmpi-2.0.0 )
+	mysql? (
+		|| ( dev-db/mariadb-connector-c dev-db/mysql-connector-c )
+		slurmdbd? ( || ( dev-db/mariadb dev-db/mysql ) )
+		)
+	munge? ( sys-auth/munge )
+	pam? ( sys-libs/pam )
+	ssl? ( dev-libs/openssl:0= )
+	lua? ( dev-lang/lua:0= )
+	!lua? ( !dev-lang/lua )
+	ipmi? ( sys-libs/freeipmi )
+	json? ( dev-libs/json-c:= )
+	amd64? ( netloc? ( sys-apps/netloc ) )
+	hdf5? ( sci-libs/hdf5:= )
+	numa? ( sys-process/numactl )
+	ofed? ( sys-fabric/ofed )
+	ucx? ( sys-cluster/ucx )
+	X? ( net-libs/libssh2 )
+	>=sys-apps/hwloc-1.1.1-r1
+	sys-libs/ncurses:0=
+	app-arch/lz4:0=
+	sys-libs/readline:0="
+DEPEND="${COMMON_DEPEND}
+	html? ( sys-apps/man2html )"
+RDEPEND="${OMMON_DEPEND}
+	acct-user/slurm
+	acct-group/slurm
+	dev-libs/libcgroup"
+
+REQUIRED_USE="torque? ( perl )"
+
+S="${WORKDIR}/${MY_P}"
+
+LIBSLURM_PERL_S="${WORKDIR}/${MY_P}/contribs/perlapi/libslurm/perl"
+LIBSLURMDB_PERL_S="${WORKDIR}/${MY_P}/contribs/perlapi/libslurmdb/perl"
+
+RESTRICT="test"
+
+src_unpack() {
+	if [[ ${PV} == *9999* ]]; then
+		git-r3_src_unpack
+	else
+		default
+	fi
+}
+
+src_prepare() {
+	tc-ld-disable-gold
+	default
+
+	# pids should go to /var/run/slurm
+	sed \
+		-e 's:/tmp:/var/tmp:g' \
+		-e "s:/var/run/slurmctld.pid:${EPREFIX}/run/slurm/slurmctld.pid:g" \
+		-e "s:/var/run/slurmd.pid:${EPREFIX}/run/slurm/slurmd.pid:g" \
+		-e "s:StateSaveLocation=.*:StateSaveLocation=${EPREFIX}/var/spool/slurm:g" \
+		-e "s:SlurmdSpoolDir=.*:SlurmdSpoolDir=${EPREFIX}/var/spool/slurm/slurmd:g" \
+		-i "${S}/etc/slurm.conf.example" \
+		|| die "Can't sed for /var/run/slurmctld.pid"
+	sed \
+		-e "s:/var/run/slurmdbd.pid:${EPREFIX}/run/slurm/slurmdbd.pid:g" \
+		-i "${S}/etc/slurmdbd.conf.example" \
+		|| die "Can't sed for /var/run/slurmdbd.pid"
+	# gentooify systemd services
+	sed \
+		-e 's:sysconfig/.*:conf.d/slurm:g' \
+		-e 's:var/run/:run/slurm/:g' \
+		-i "${S}/etc"/*.service.in \
+		|| die "Can't sed systemd services for sysconfig or var/run/"
+
+	hprefixify auxdir/{ax_check_zlib,x_ac_{lz4,ofed,munge}}.m4
+	eautoreconf
+}
+
+src_configure() {
+	local myconf=(
+		--sysconfdir="${EPREFIX}/etc/${PN}"
+		--with-hwloc="${EPREFIX}/usr"
+		--docdir="${EPREFIX}/usr/share/doc/${P}"
+		--htmldir="${EPREFIX}/usr/share/doc/${P}"
+	)
+	use pam && myconf+=( --with-pam_dir=$(getpam_mod_dir) )
+	use mysql || myconf+=( --without-mysql_config )
+	use amd64 && myconf+=( $(use_with netloc) )
+	econf "${myconf[@]}" \
+		$(use_enable debug) \
+		$(use_enable pam) \
+		$(use_enable X x11) \
+		$(use_with ssl) \
+		$(use_with munge) \
+		$(use_with json) \
+		$(use_with hdf5) \
+		$(use_with ofed) \
+		$(use_with ucx) \
+		$(use_enable static-libs static) \
+		$(use_enable multiple-slurmd)
+
+	# --htmldir does not seems to propagate... Documentations are installed
+	# in /usr/share/doc/slurm-2.3.0/html
+	# instead of /usr/share/doc/slurm-2.3.0.2/html
+	sed \
+		-e "s|htmldir = .*/html|htmldir = \${prefix}/share/doc/slurm-${PVR}/html|g" \
+		-i doc/html/Makefile || die
+	if use perl ; then
+		# small hack to make it compile
+		mkdir -p "${S}/src/api/.libs" || die
+		mkdir -p "${S}/src/db_api/.libs" || die
+		touch "${S}/src/api/.libs/libslurm.so" || die
+		touch "${S}/src/db_api/.libs/libslurmdb.so" || die
+		cd "${LIBSLURM_PERL_S}" || die
+		S="${LIBSLURM_PERL_S}" SRC_PREP="no" perl-module_src_configure
+		cd "${LIBSLURMDB_PERL_S}" || die
+		S="${LIBSLURMDB_PERL_S}" SRC_PREP="no" perl-module_src_configure
+		cd "${S}" || die
+		rm -rf "${S}/src/api/.libs" "${S}/src/db_api/.libs" || die
+	fi
+}
+
+src_compile() {
+	default
+	use pam && emake -C contribs/pam
+	if use perl ; then
+		cd "${LIBSLURM_PERL_S}" || die
+		S="${LIBSLURM_PERL_S}" perl-module_src_compile
+		cd "${LIBSLURMDB_PERL_S}" || die
+		S="${LIBSLURMDB_PERL_S}" perl-module_src_compile
+		cd "${S}" || die
+	fi
+	use torque && emake -C contribs/torque
+}
+
+src_install() {
+	default
+	use pam && emake DESTDIR="${D}" -C contribs/pam install
+	if use perl; then
+		cd "${LIBSLURM_PERL_S}" || die
+		S="${LIBSLURM_PERL_S}" perl-module_src_install
+		cd "${LIBSLURMDB_PERL_S}" || die
+		S="${LIBSLURMDB_PERL_S}" perl-module_src_install
+		cd "${S}" || die
+	fi
+	if use torque; then
+		emake DESTDIR="${D}" -C contribs/torque
+		rm -f "${ED}/usr/bin/mpiexec" || die
+	fi
+	use static-libs || find "${ED}" -name '*.la' -exec rm {} +
+	# install sample configs
+	keepdir /etc/slurm
+	insinto /etc/slurm
+	doins \
+		etc/bluegene.conf.example \
+		etc/cgroup.conf.example \
+		etc/slurm.conf.example \
+		etc/slurmdbd.conf.example
+	exeinto /etc/slurm
+	keepdir /etc/slurm/layouts.d
+	insinto /etc/slurm/layouts.d
+	newins etc/layouts.d.power.conf.example power.conf.example
+	newins etc/layouts.d.power_cpufreq.conf.example power_cpufreq.conf.example
+	newins etc/layouts.d.unit.conf.example unit.conf.example
+	# install init.d files
+	newinitd "$(prefixify_ro "${FILESDIR}/slurmd.initd")" slurmd
+	newinitd "$(prefixify_ro "${FILESDIR}/slurmctld.initd")" slurmctld
+	newinitd "$(prefixify_ro "${FILESDIR}/slurmdbd.initd")" slurmdbd
+	# install conf.d files
+	newconfd "${FILESDIR}/slurm.confd" slurm
+	# install logrotate file
+	insinto /etc/logrotate.d
+	newins "${FILESDIR}/logrotate" slurm
+	# install bashcomp
+	newbashcomp contribs/slurm_completion_help/slurm_completion.sh scontrol
+	bashcomp_alias scontrol \
+		sreport sacctmgr squeue scancel sshare sbcast sinfo \
+		sprio sacct salloc sbatch srun sattach sdiag sstat
+	# install systemd files
+	systemd_newtmpfilesd "${FILESDIR}/slurm.tmpfiles" slurm.conf
+	systemd_dounit etc/slurmd.service etc/slurmctld.service etc/slurmdbd.service
+
+	cd "${D}"/lib/systemd/system || die
+
+	for file in slurm*; do
+		sed -i -e '/^EnvironmentFile=.*/d' ${file} || die
+	done
+}
+
+pkg_preinst() {
+	if use munge; then
+		sed -i 's,\(SLURM_USE_MUNGE=\).*,\11,' "${ED}"etc/conf.d/slurm || die
+	fi
+}
+
+create_folders_and_fix_permissions() {
+	einfo "Fixing permissions in ${@}"
+	mkdir -p ${@} || die
+	chown -R ${PN}:${PN} ${@} || die
+}
+
+pkg_postinst() {
+	paths=(
+		"${EROOT}"var/${PN}/checkpoint
+		"${EROOT}"var/${PN}
+		"${EROOT}"var/spool/${PN}/slurmd
+		"${EROOT}"var/spool/${PN}
+		"${EROOT}"var/log/${PN}
+		/var/tmp/${PN}/${PN}d
+		/var/tmp/${PN}
+		/run/${PN}
+	)
+	local folder_path
+	for folder_path in ${paths[@]}; do
+		create_folders_and_fix_permissions $folder_path
+	done
+	echo
+
+	elog "Please visit the file '/usr/share/doc/${P}/html/configurator.html"
+	elog "through a (javascript enabled) browser to create a configureation file."
+	elog "Copy that file to /etc/slurm/slurm.conf on all nodes (including the headnode) of your cluster."
+	echo
+	elog "For cgroup support, please see https://www.schedmd.com/slurmdocs/cgroup.conf.html"
+	elog "Your kernel must be compiled with the wanted cgroup feature:"
+	elog "    For the proctrack plugin:"
+	elog "        freezer"
+	elog "    For the task plugin:"
+	elog "        cpuset, memory, devices"
+	elog "    For the accounting plugin:"
+	elog "        cpuacct, memory, blkio"
+	elog "Then, set these options in /etc/slurm/slurm.conf:"
+	elog "    ProctrackType=proctrack/cgroup"
+	elog "    TaskPlugin=task/cgroup"
+	einfo
+	ewarn "Paths were created for slurm. Please use these paths in /etc/slurm/slurm.conf:"
+	for folder_path in ${paths[@]}; do
+		ewarn "    ${folder_path}"
+	done
+}