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* sci-libs/spr: Allow for compiling with GCC 6David Seifert2016-09-202-10/+80
| | | | | | | Gentoo-bug: 594376 * EAPI=6 Package-Manager: portage-2.3.1
* sci-libs/libgenome: Remove broken live ebuildDavid Seifert2016-09-201-31/+0
| | | | Package-Manager: portage-2.3.1
* sci-libs/libgenome: Allow for compiling with GCC 6David Seifert2016-09-202-9/+47
| | | | | | | Gentoo-bug: 594372 * EAPI=6 Package-Manager: portage-2.3.1
* sci-libs/hdf5: update SRC_URI, fixes #594454Kacper Kowalik2016-09-203-3/+3
| | | | Package-Manager: portage-2.2.28
* sci-libs/hdf5: version bumpKacper Kowalik2016-09-192-0/+105
| | | | Package-Manager: portage-2.2.28
* sci-libs/cifparse-obj: Allow for compiling with GCC 6David Seifert2016-09-172-2/+19
| | | | | | | | Gentoo-bug: 594054 * Remove broken declarations of the 'strcasecmp' and 'strncasecmp' functions. Package-Manager: portage-2.3.0
* sci-libs/geos: Allow for compiling with GCC 6David Seifert2016-09-173-0/+53
| | | | | | | Gentoo-bug: 593934 * Patches taken from Upstream trunk Package-Manager: portage-2.3.0
* sci-libs/flann: Version bump to 1.9.1David Seifert2016-09-152-0/+87
| | | | | | | | | Gentoo-bug: 593856 * EAPI=6 * Removed src_test(), as flann now requires ruby for tests. Package-Manager: portage-2.3.0
* sci-libs/indilib: remove oldMichael Palimaka2016-09-162-43/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/clipper: Remove old ebuildDavid Seifert2016-09-141-57/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/clipper: Allow for compiling with GCC 6David Seifert2016-09-142-0/+65
| | | | | | | Gentoo-bug: 585540 * EAPI=6 Package-Manager: portage-2.3.0
* sci-libs/libcerf: Stable for HPPA (bug #577516).Jeroen Roovers2016-09-111-1/+1
| | | | | Package-Manager: portage-2.3.0 RepoMan-Options: --ignore-arches
* sci-libs/gerris: Remove oldDavid Seifert2016-09-094-202/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/gerris: Patch use of sci-libs/lis function prototypesDavid Seifert2016-09-096-6/+111
| | | | | | | | | | | | | Gentoo-bug: 593282 * EAPI=6 * Made all PATCHES -p1 compliant * Exchanged -D_BSD_SOURCE with -D_DEFAULT_SOURCE in order to silence deprecation from dev-libs/glib * Add subslot operators for sci-libs/netcdf and sci-libs/gsl * Add proper SLOT and operator for sci-libs/fftw * Delete all .la files, as package provides .pc files Package-Manager: portage-2.3.0
* sci-libs/lis: Version bump to 1.6.5David Seifert2016-09-092-1/+1
| | | | Package-Manager: portage-2.3.0
* sci-libs/matio: version bump to 1.5.8Tim Harder2016-09-082-0/+48
| | | | | * add subslot -- 1.5.2 -> 1.5.7 changed the soname version * fix static-libs handling
* sci-libs/lis: Remove oldDavid Seifert2016-09-073-104/+0
| | | | Package-Manager: portage-2.3.0
* sci-libs/lis: Version bump to 1.6.2David Seifert2016-09-073-0/+445
| | | | | | * EAPI=6 Package-Manager: portage-2.3.0
* sci-libs/vtk: remove java@ from the list of maintainers.Patrice Clement2016-09-071-4/+0
| | | | Package-Manager: portage-2.2.28
* sci-libs/dsdp: Removed EAPI 4 ebuild dsdp-5.8-r2.ebuildGerhard Bräunlich2016-09-062-83/+3
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2249 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/dsdp: revbump (EAPI 4 -> 6)Gerhard Bräunlich2016-09-063-4/+84
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2249 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/neartree: Version bump to 5.1.1Gerhard Bräunlich2016-09-062-0/+34
| | | | | | | | | * EAPI=6 Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2255 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/neartree: Fix overlong DESCRIPTIONDavid Seifert2016-09-061-2/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/cqrlib: Version bump to 1.1.3 and EAPI 4 -> 6Gerhard Bräunlich2016-09-052-0/+60
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2248 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/cqrlib: Fix overlong DESCRIPTIONDavid Seifert2016-09-051-2/+2
| | | | Package-Manager: portage-2.3.0
* sci-libs/xdmf2: Call 'python_optimize' only when USE=pythonDavid Seifert2016-09-041-1/+1
| | | | | | Gentoo-bug: 592848 Package-Manager: portage-2.3.0
* sci-libs/xdmf2: Remove heuristics to help detect HDF5_ROOTDavid Seifert2016-09-032-0/+115
| | | | | | | | | | | | Gentoo-bug: 591302 * EAPI=6 * Add missing RDEPEND on dev-libs/boost * Add ${PYTHON_REQUIRED_USE} to REQUIRED_USE * [QA] Byte-compile XdmfCore.py and Xdmf.py * Thanks to Michael Palimaka <kensington@gentoo.org> for helping to identify the culprit Package-Manager: portage-2.3.0
* sci-libs/cmpfit: Removed EAPI 4 ebuild cmpfit-1.2.ebuildGerhard Bräunlich2016-09-021-39/+0
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2190 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/cmpfit: revbump (EAPI 4 -> 6)Gerhard Bräunlich2016-09-021-0/+39
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2190 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/ccfits: revbump (EAPI 4 -> 6)Gerhard Bräunlich2016-09-022-2/+51
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2189 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/buddy: Removed EAPI 4 ebuild buddy-2.4.ebuildGerhard Bräunlich2016-09-021-39/+0
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2188 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/buddy: revbump (EAPI 4 -> 6)Gerhard Bräunlich2016-09-021-0/+37
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2188 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/fftw: Rewrite ebuild to EAPI=6 standardsDavid Seifert2016-08-314-16/+154
| | | | | | | | * Use multibuild.eclass for single/double precision * Make patches -p1 compliant * Simplify src_configure phase Package-Manager: portage-2.3.0
* sci-libs/libsvm: Version bumpDavid Seifert2016-08-302-0/+115
| | | | Package-Manager: portage-2.3.0
* sci-libs/fftw: re-add keywords for multilib ebuildChristoph Junghans2016-08-291-1/+1
| | | | Package-Manager: portage-2.2.28
* sci-libs/fftw: Restore QA-checked multilib-minimal_src_installDavid Seifert2016-08-251-9/+1
| | | | Package-Manager: portage-2.3.0
* sci-libs/mkl: revbump: Ported EAPI from 5 to 6Gerhard Bräunlich2016-08-231-0/+367
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2095 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/mkl: Fixed ebuildGerhard Bräunlich2016-08-231-7/+9
| | | | | | | | | | Gentoo-bug: #589610 Reported-by: masum.habib@gmail.com Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2095 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/vtk: Allow nvidia-drivers usage (#563750)Pacho Ramos2016-08-211-0/+390
| | | | Package-Manager: portage-2.3.0
* sci-libs/votca-tools: version bumpChristoph Junghans2016-08-192-0/+61
| | | | Package-Manager: portage-2.2.28
* sci-libs/indilib: amd64/x86 stableMichael Palimaka2016-08-201-1/+1
| | | | | | Gentoo-bug: 590488 Package-Manager: portage-2.3.0
* sci-libs/scikits_learn: using system joblib for cross_validation moduleHorea Christian2016-08-131-1/+2
| | | | | | | Package-Manager: portage-2.3.0 Closes: https://github.com/gentoo/gentoo/pull/2065 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/metis: Make all patches -p1 compliantDavid Seifert2016-08-122-11/+11
| | | | | | Gentoo-bug: 591090 Package-Manager: portage-2.3.0
* sci-libs/metis: Ported EAPI from 5 to 6Gerhard Bräunlich2016-08-115-12/+12
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2069 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/metis: Produce standard pkg-config fileGerhard Bräunlich2016-08-111-7/+7
| | | | | | | | | | Gentoo-bug: 588148 Package-Manager: portage-2.2.28 Patch by Viacheslav Ostroukh Closes: https://github.com/gentoo/gentoo/pull/2069 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/fftw: use multilib mpiChristoph Junghans2016-08-111-0/+191
| | | | | | | Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2062 Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/fftw: workaround for bug #590446Christoph Junghans2016-08-091-1/+9
| | | | Package-Manager: portage-2.2.28
* sci-libs/libsvm: Install scripts for all python implsDavid Seifert2016-08-071-3/+1
| | | | Package-Manager: portage-2.3.0
* sci-libs/libsvm: Use 'python_newscript' instead of 'python_doscript'David Seifert2016-08-071-2/+1
| | | | Package-Manager: portage-2.3.0
* sci-libs/libsvm: fix the hardcoded path for grid.pyGöktürk Yüksek2016-08-073-4/+118
| | | | | | | | | | | | | Add 2 sed statements to src_prepare() to replace the hardcoded path './grid.py' with the correct one and subsequently rename 'grid.py' to 'svm-grid'. Revbumped, since this is a runtime failure. Package-Manager: portage-2.2.28 Closes: https://github.com/gentoo/gentoo/pull/2032 Signed-off-by: David Seifert <soap@gentoo.org>