Version bump, address bug 314659

Package-Manager: portage-2.2_rc67/cvs/Linux x86_64

1 files changed, 38 insertions, 0 deletions

diff --git a/sci-biology/mosaik/mosaik-1.0.1388.ebuild b/sci-biology/mosaik/mosaik-1.0.1388.ebuild
new file mode 100644
index 000000000000..e08292a3f319
--- /dev/null
+++ b/sci-biology/mosaik/mosaik-1.0.1388.ebuild
@@ -0,0 +1,38 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/mosaik/mosaik-1.0.1388.ebuild,v 1.1 2010/04/11 17:29:40 weaver Exp $
+
+EAPI="2"
+
+DESCRIPTION="A reference-guided aligner for next-generation sequencing technologies"
+HOMEPAGE="http://code.google.com/p/mosaik-aligner/"
+SRC_URI="http://mosaik-aligner.googlecode.com/files/Mosaik-${PV}-source.tar.bz2"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/mosaik-aligner"
+
+src_prepare() {
+	sed -i 's/-static//' src/includes/linux.inc || die
+}
+
+src_compile() {
+	emake -C src || die
+#	emake -C MosaikTools/c++ || die
+#	emake -C MosaikTools/perl || die
+}
+
+src_install() {
+	dobin bin/* || die
+
+	insinto /usr/share/${PN}
+	doins -r MosaikTools || die
+
+	dodoc README Mosaik-1.0-Documentation.pdf
+}