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authorAndrey Kislyuk <weaver@gentoo.org>2010-05-05 06:54:08 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2010-05-05 06:54:08 +0000
commit86eb52248fbb4edb7ddd3b210623b6a5eb1a7b14 (patch)
treec704c162915d64de8556cdf479a76f1654009c70 /sci-biology/sibsim4
parentremove old (diff)
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Version bump
Package-Manager: portage-2.2_rc67/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/sibsim4')
-rw-r--r--sci-biology/sibsim4/ChangeLog9
-rw-r--r--sci-biology/sibsim4/Manifest14
-rw-r--r--sci-biology/sibsim4/sibsim4-0.20.ebuild28
3 files changed, 38 insertions, 13 deletions
diff --git a/sci-biology/sibsim4/ChangeLog b/sci-biology/sibsim4/ChangeLog
index a51f1739d13e..d8cbaa90b227 100644
--- a/sci-biology/sibsim4/ChangeLog
+++ b/sci-biology/sibsim4/ChangeLog
@@ -1,6 +1,11 @@
# ChangeLog for sci-biology/sibsim4
-# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/sibsim4/ChangeLog,v 1.2 2009/04/04 19:21:04 maekke Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/sibsim4/ChangeLog,v 1.3 2010/05/05 06:54:08 weaver Exp $
+
+*sibsim4-0.20 (05 May 2010)
+
+ 05 May 2010; Andrey Kislyuk <weaver@gentoo.org> +sibsim4-0.20.ebuild:
+ Version bump
04 Apr 2009; Markus Meier <maekke@gentoo.org> sibsim4-0.17.ebuild:
amd64/x86 stable, bug #263770
diff --git a/sci-biology/sibsim4/Manifest b/sci-biology/sibsim4/Manifest
index d106c7b6ca6d..0b6f120b07bd 100644
--- a/sci-biology/sibsim4/Manifest
+++ b/sci-biology/sibsim4/Manifest
@@ -1,14 +1,6 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
DIST SIBsim4-0.17.tar.gz 30822 RMD160 9ad3ede299212145f9c095a55c446558947a2396 SHA1 adec7e0872b6a5c93b493e320ee87be2e90dbb38 SHA256 f01d53cb07d946d1f488d97e157bfff858233a2f5ce960ba26a039ee246a3c6f
+DIST SIBsim4-0.20.tar.gz 32118 RMD160 6f3d730660e9f57ace23468767dec00f00533d38 SHA1 cddb574d8403a1a4d38a39f74d7a7bd54cb0364b SHA256 ee02ae5f678d6843cf3ba267140dfccf9648a60d1f01263ae70d405723a35463
EBUILD sibsim4-0.17.ebuild 650 RMD160 1fd29732dc28e178b8753302a2f6de1749dd5f87 SHA1 4330970afff1a801934eea5fc9302246fca6c74a SHA256 67d1459810f523ad4466bea367d87e2886f9aa69165478a21436e2e4a2347790
-MISC ChangeLog 466 RMD160 585bb909ff6c916661f9c3c4a9b3f7ac95ec22b4 SHA1 310f49942f27207b3ac3df462c61271cd70d4b2e SHA256 abc12c79ec82bbb60630aec2fb33180d3c8ef581957ef5765b1d72de15d2771e
+EBUILD sibsim4-0.20.ebuild 650 RMD160 c1069fd7f247d90f79cb8d39b13038765ed458ae SHA1 c0289a44ffa4a37a309450e2552e5f6f913fe3b1 SHA256 72cdadc4a30fc11aff562190a00a8c1c53e99c974a2466971f9b6bb645a8b99f
+MISC ChangeLog 583 RMD160 45110aee80eccf7993f17e0eaee14f4f06cad446 SHA1 a42f52eb88ebb71d7ed5679e944ae4793df95f8a SHA256 609e74396cfe3f93cd5db18fc586cd86f74d486609b224be3ce22a65aa900a4a
MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.10 (GNU/Linux)
-
-iEYEARECAAYFAknXszgACgkQkKaRLQcq0GI6HQCglKKO76STo3HTxgnv1YKEY+fE
-dyUAnRdLIl0BDsc9T0+pNj/lqjicuyiX
-=UpVY
------END PGP SIGNATURE-----
diff --git a/sci-biology/sibsim4/sibsim4-0.20.ebuild b/sci-biology/sibsim4/sibsim4-0.20.ebuild
new file mode 100644
index 000000000000..ea9ff4bade11
--- /dev/null
+++ b/sci-biology/sibsim4/sibsim4-0.20.ebuild
@@ -0,0 +1,28 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/sibsim4/sibsim4-0.20.ebuild,v 1.1 2010/05/05 06:54:08 weaver Exp $
+
+EAPI="2"
+
+DESCRIPTION="A rewrite and improvement upon sim4, a DNA-mRNA aligner"
+HOMEPAGE="http://sibsim4.sourceforge.net/"
+SRC_URI="mirror://sourceforge/${PN}/SIBsim4-${PV}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+S="${WORKDIR}/SIBsim4-${PV}"
+
+src_prepare() {
+ sed -i 's/CFLAGS = \(.*\)/CFLAGS := \1 ${CFLAGS}/' "${S}/Makefile"
+}
+
+src_install() {
+ dobin SIBsim4
+ doman SIBsim4.1
+}