From a515fbc5efe90cb93d2de0bd439a6b30a77b1ef3 Mon Sep 17 00:00:00 2001 From: Justin Lecher Date: Thu, 6 Mar 2014 11:25:35 +0000 Subject: sci-biology/rebase: Version Bump Package-Manager: portage-2.2.8-r1/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB! --- sci-biology/rebase/ChangeLog | 9 +++++-- sci-biology/rebase/Manifest | 26 +++++++++++++++++++- sci-biology/rebase/rebase-1403.ebuild | 46 +++++++++++++++++++++++++++++++++++ 3 files changed, 78 insertions(+), 3 deletions(-) create mode 100644 sci-biology/rebase/rebase-1403.ebuild (limited to 'sci-biology/rebase') diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 8ba31e7ad297..6f8be6b54942 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/rebase -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.119 2013/12/01 17:02:19 jlec Exp $ +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.120 2014/03/06 11:25:34 jlec Exp $ + +*rebase-1403 (06 Mar 2014) + + 06 Mar 2014; Justin Lecher +rebase-1403.ebuild: + Version Bump *rebase-1312 (01 Dec 2013) diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index b5a3eaf2dc5d..5f573905d52c 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,14 +1,38 @@ +-----BEGIN PGP SIGNED MESSAGE----- +Hash: SHA512 + DIST rebase-1111.tar.xz 27905208 SHA256 a4071740cf41afdbae0ecb91648bae954b8b708b00d4b0d6bb21a746f6a9201c SHA512 aa5cb57ea5ac7a1f57a817d04be434321b6a7a6079f10abe9453bf46ba70da2549acca6e93034423e5a70815668f429b7b111b703765b149209b71ddef8ee1a4 WHIRLPOOL 59f1d4251a55be173c1dd32ad7fc7975b8620ddb4310798169c834df7105a6f73908af4618d8cd4dd4bde1428dc5dd230efc64d69ac69ed5942b5e4f4cb72f92 DIST rebase-1202.tar.xz 25806116 SHA256 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+IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} -- cgit v1.2.3-65-gdbad