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* sci-biology/biopython: add 1.79David Seifert2021-12-202-0/+63
* sci-biology/ApE: update HOMEPAGE, SRC_URI; s/eutils/desktop/Marek Szuba2021-11-261-4/+4
* sci-biology/stride: de-stabilize for ~ppc, bug #823768Georgy Yakovlev2021-11-181-1/+1
* sci-biology/muscle: de-stabilize for ~ppc, bug #823768Georgy Yakovlev2021-11-181-2/+2
* sci-biology/phyml: de-stabilize for ~ppc, bug #823768Georgy Yakovlev2021-11-181-2/+2
* sci-biology/clustalw: de-stabilize for ~ppc, bug #823768Georgy Yakovlev2021-11-181-2/+2
* sci-biology/samtools: drop 1.10-r1David Seifert2021-10-112-57/+0
* sci-biology/bcftools: drop 1.10.2David Seifert2021-10-112-44/+0
* sci-biology/pysam: drop 0.16.0.1-r1David Seifert2021-10-113-98/+0
* sci-biology/pysam: block <setuptools-58 for 0.16.0.1Arthur Zamarin2021-10-091-4/+4
* sci-biology/pysam: add 0.17.0David Seifert2021-10-032-0/+67
* sci-biology/bcftools: add 1.13David Seifert2021-10-032-0/+45
* sci-biology/samtools: add 1.13David Seifert2021-10-032-0/+48
* sci-biology/mira: Remove last-rited packageJakov Smolić2021-09-286-173/+0
* **/metadata.xml: Replace http by https in DOCTYPE elementUlrich Müller2021-09-11129-129/+129
* sci-biology/wgs-assembler: Remove last-rited packageJakov Smolić2021-09-045-351/+0
* sci-biology/ncbi-tools: Remove last-rited packageJakov Smolić2021-08-3010-546/+0
* sci-biology/njplot: Remove last-rited packageJakov Smolić2021-08-305-129/+0
* sci-biology/psipred: Remove last-rited packageJakov Smolić2021-08-306-155/+0
* sci-biology/wise: Port to EAPI 8Jakov Smolic2021-08-223-73/+109
* sci-biology/mrbayes: Port to EAPI 8Jakov Smolic2021-08-222-22/+13
* sci-biology/plink: Port to EAPI 8Jakov Smolic2021-08-221-6/+7
* sci-biology/velvet: Port to EAPI 8Jakov Smolic2021-08-221-9/+6
* sci-biology/bioperl-db: Drop 1.6.9 (r0), EAPI5--Andreas Sturmlechner2021-08-191-47/+0
* sci-biology/bioperl-db: x86 stable wrt bug #808198Agostino Sarubbo2021-08-191-1/+1
* sci-biology/bioperl-db: amd64 stable wrt bug #808198Agostino Sarubbo2021-08-161-1/+1
* sci-biology/embassy-vienna: remove `append-cflags -std=gnu89`David Seifert2021-08-022-7/+37
* sci-biology/emboss: Fix C99 `bool` clashDavid Seifert2021-08-016-562/+10
* sci-biology/bowtie: fix QA issuesDavid Seifert2021-08-012-13/+8
* sci-biology/bowtie: drop 2.2.9David Seifert2021-08-013-91/+0
* sci-biology/bowtie: add 2.4.4David Seifert2021-08-012-0/+56
* sci-biology/mosaik: Fix GCC 11 buildDavid Seifert2021-07-262-4/+64
* sci-biology/abyss: drop haskell@ from maintainersSergei Trofimovich2021-07-241-4/+0
* sci-biology/foldingathome: drop old versionConrad Kostecki2021-07-181-140/+0
* sci-biology/foldingathome: migrate to GLEP 81Conrad Kostecki2021-07-181-0/+138
* sci-biology/samtools: Add sys-libs/ncurses[unicode(+)]David Seifert2021-07-171-2/+2
* sci-biology/bcftools: PYTHON_MULTI_USEDEP -> PYTHON_USEDEPDavid Seifert2021-07-171-3/+3
* sci-biology/bamtools: drop 2.5.1David Seifert2021-06-202-34/+0
* sci-biology/bamtools: add 2.5.2David Seifert2021-06-202-0/+34
* sci-biology/plink: include DEPEND in RDEPENDSam James2021-06-181-4/+6
* sci-biology/ncbi-tools: add pkgconfig or pkgconfig-referenced libs depsSam James2021-06-181-0/+2
* sci-biology/mira: Depend on dev-libs/boost:=[threads(+)]David Seifert2021-06-181-1/+1
* sci-biology/uchime: workaround failure with GCC 11Sam James2021-06-151-2/+9
* sci-biology/ucsc-genome-browser: fix VariableScope ((E)ROOT)Sam James2021-06-111-4/+6
* sci-biology/amap: Support newer javaPacho Ramos2021-06-061-4/+4
* sci-biology/GBrowse: fix BadDefaultUseFlagsSam James2021-06-031-2/+2
* sci-biology/bioperl-run: fix BadDefaultUseFlagsSam James2021-06-031-2/+2
* sci-biology/embassy-mse: ncurses isn't optionalDavid Seifert2021-05-162-10/+10
* sci-biology/samtools: add missing multilib inherit for get_libnameSam James2021-05-131-2/+2
* sci-biology/treeviewx: Respect ARDavid Seifert2021-05-092-0/+11