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* sci-libs/flann: Drop 1.9.1-r2Andreas Sturmlechner2020-05-231-95/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/flann: Fix HOMEPAGE, old one was deadAndreas Sturmlechner2020-05-231-1/+1
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/flann: Use system-lz4 and fix underlinkingAndreas Sturmlechner2020-05-232-0/+219
| | | | | | Closes: https://bugs.gentoo.org/681898 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/Fiona: Remove last-rited pkgMichał Górny2020-05-236-105/+0
| | | | | Closes: https://bugs.gentoo.org/718498 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/dealii: fix QA warningsMatthias Maier2020-05-213-21/+7
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/dealii: version bump to 9.2.0, update 9999Matthias Maier2020-05-214-6/+175
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/votca-tools: amd64 stable wrt bug #685046Agostino Sarubbo2020-05-211-2/+2
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/liborigin: Drop 20110829-r1Andreas Sturmlechner2020-05-212-63/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/liborigin: 3.0.0 version bumpAndreas Sturmlechner2020-05-217-3/+562
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/lapack: sparc stable wrt bug #698756Agostino Sarubbo2020-05-201-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="sparc" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/rtabmap: Bump to 0.19.7Alexis Ballier2020-05-185-0/+156
| | | | | | | | | Fixes build with: - PCL 1.11 - Boost 1.73 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/libxc: update homepageAlexey Sokolov2020-05-173-9/+9
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexey Sokolov <sokolov@google.com> Signed-off-by: Aaron Bauman <bman@gentoo.org>
* sci-libs/klu: keyworded 1.3.9 for hppa, bug #716982Rolf Eike Beer2020-05-161-1/+1
| | | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="hppa" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/tensorflow-estimator: bump 2.2.0Jason Zaman2020-05-162-0/+70
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.20 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/tensorflow: bump 2.2.0Jason Zaman2020-05-162-6/+17
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.20 Signed-off-by: Jason Zaman <perfinion@gentoo.org>
* sci-libs/suitesparse: keyworded 5.4.0 for sparc, bug #716982Rolf Eike Beer2020-05-151-1/+1
| | | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/spqr: keyworded 2.0.9 for sparc, bug #716982Rolf Eike Beer2020-05-151-1/+1
| | | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/klu: keyworded 1.3.9 for sparc, bug #716982Rolf Eike Beer2020-05-151-1/+1
| | | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="sparc" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sergei Trofimovich <slyfox@gentoo.org>
* sci-libs/ViSP: bump to 3.3.0Alexis Ballier2020-05-153-0/+101
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/pcl: bump to 1.11.0Alexis Ballier2020-05-153-6/+91
| | | | | | | | Fixes build with boost 1.73 as a side effect. Closes: https://bugs.gentoo.org/722732 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ignition-fuel-tools: initial importAlexis Ballier2020-05-153-0/+54
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ignition-common: remove unused fileAlexis Ballier2020-05-151-12/+0
| | | | | | | cp error on my side Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ignition-common: initial importAlexis Ballier2020-05-154-0/+64
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/ignition-math: bump to 6.4.0Alexis Ballier2020-05-153-0/+39
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Alexis Ballier <aballier@gentoo.org>
* sci-libs/scipy: x86 stable wrt bug #722660Agostino Sarubbo2020-05-131-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/fftw: Workaround missing -mavx2 with avx2 flagMichał Górny2020-05-131-0/+4
| | | | | Bug: https://bugs.gentoo.org/698572 Signed-off-by: Michał Górny <mgorny@gentoo.org>
* sci-libs/linux-gpib: Version bumpAndreas K. Hüttel2020-05-122-0/+179
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib-modules: Version bumpAndreas K. Hüttel2020-05-122-0/+70
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/vtk: fix 8.2.0 ebuildMatthias Maier2020-05-121-5/+4
| | | | | | | | | | | | | - fix bundled libproj configuration. Thanks to Tiernan Hubble for pointing this out - use system mpi4py Closes: https://bugs.gentoo.org/720372 Closes: https://bugs.gentoo.org/721412 Closes: https://bugs.gentoo.org/721802 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/scipy: amd64 stable wrt bug #722660Agostino Sarubbo2020-05-121-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/vtk: add python compatMatthias Maier2020-05-122-2/+2
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/kim-api: add missing fortran depChristoph Junghans2020-05-111-1/+1
| | | | | | Closes: https://bugs.gentoo.org/722428 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Christoph Junghans <junghans@gentoo.org>
* sci-libs/scikits: x86 stable wrt bug #721496Mikle Kolyada2020-05-091-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="x86" Signed-off-by: Mikle Kolyada <zlogene@gentoo.org>
* sci-libs/scikits_learn: x86 stable wrt bug #721496Mikle Kolyada2020-05-091-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="x86" Signed-off-by: Mikle Kolyada <zlogene@gentoo.org>
* sci-libs/scikits: amd64 stable wrt bug #721496Mikle Kolyada2020-05-091-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="amd64" Signed-off-by: Mikle Kolyada <zlogene@gentoo.org>
* sci-libs/scikits_learn: amd64 stable wrt bug #721496Mikle Kolyada2020-05-091-1/+1
| | | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 RepoMan-Options: --include-arches="amd64" Signed-off-by: Mikle Kolyada <zlogene@gentoo.org>
* sci-libs/linux-gpib-modules: Remove oldAndreas K. Hüttel2020-05-094-107/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: Remove oldAndreas K. Hüttel2020-05-093-185/+0
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib: Version bumpAndreas K. Hüttel2020-05-092-0/+179
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/linux-gpib-modules: Version bumpAndreas K. Hüttel2020-05-093-0/+124
| | | | | Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Andreas K. Hüttel <dilfridge@gentoo.org>
* sci-libs/coinor-cbc: new EAPI=7 version 2.10.5.Michael Orlitzky2020-05-083-75/+82
| | | | | | | | Standard version/EAPI update, documenting all of the now-familiar coinor-* weirdness as I go along. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-cbc: add <upstream> tag to metadata.xml.Michael Orlitzky2020-05-081-5/+9
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-cgl: new EAPI=7 version 0.60.3.Michael Orlitzky2020-05-083-69/+82
| | | | | | | | | | Standardish EAPI/version bump, documenting all of the coinor-* weirdness that I'm now familiar with. I added a subslot 0/1 corresponding to the major soname component in, for example, libCgl.so.1.10.3. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-cgl: add an "<upstream>" tag to metadata.xml.Michael Orlitzky2020-05-081-11/+14
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-vol: new EAPI=7 version 1.5.4.Michael Orlitzky2020-05-083-69/+83
| | | | | | | | | | A standard version/EAPI bump, with the usual coinor-* weirdness now somewhat documented. Portage is complaining about the precompressed example data, but I think that's a portage problem since I've explicitly excluded it with "docompress -x". Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-vol: add an "<upstream>" tag to metadata.xml.Michael Orlitzky2020-05-081-9/+12
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-dylp: new EAPI=7 version 1.10.4.Michael Orlitzky2020-05-083-64/+78
| | | | | | | | Analogous the other recent coinor-* version bumps. I've added some comments explaining the weirdness that pervades these ebuilds. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-dylp: add an "<upstream>" tag to metadata.xml.Michael Orlitzky2020-05-081-11/+14
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-clp: new EAPI=7 version 1.17.6.Michael Orlitzky2020-05-085-140/+132
| | | | | | | | | | | | | | | Another "standard" version bump that is getting less standard. I've added the usual coinor-* hacks and comments explaining them, but this package is worse than some of the others. The mumps and libscotch dependencies are being neglected in Gentoo, so a lot of that stuff is broken. To work around it, we now require sci-libs/mumps (and therefore sci-libs/scotch) to be built without USE=mpi. I don't feel great about this ebuild, but it's a necessary step towards a modern set of coinor-* packages that we can begin fixing in earnest. Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/coinor-clp: add an "<upstream>" tag to metadata.xml.Michael Orlitzky2020-05-081-19/+26
| | | | | Package-Manager: Portage-2.3.89, Repoman-2.3.20 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>