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* sci-libs/libgeotiff: amd64 stable wrt bug #813174Agostino Sarubbo2021-09-151-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libqalculate: x86 stable wrt bug #812974Agostino Sarubbo2021-09-141-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libqalculate: ppc64 stable wrt bug #812974Agostino Sarubbo2021-09-141-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/libqalculate: amd64 stable wrt bug #812974Agostino Sarubbo2021-09-141-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/openblas: Stabilize 0.3.17 amd64, #812847Sam James2021-09-141-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/scikit-image: Fix DISTUTILS_USE_SETUPTOOLSJakov Smolić2021-09-131-2/+1
| | | | | Closes: https://bugs.gentoo.org/810263 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/rocBLAS: Use standard DOCTYPE in metadata.xmlUlrich Müller2021-09-111-1/+1
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* **/metadata.xml: Replace http by https in DOCTYPE elementUlrich Müller2021-09-11257-257/+257
| | | | | Bug: https://bugs.gentoo.org/552720 Signed-off-by: Ulrich Müller <ulm@gentoo.org>
* sci-libs/gdal: x86 stable wrt bug #812056Agostino Sarubbo2021-09-091-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="x86" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: ppc64 stable wrt bug #812056Agostino Sarubbo2021-09-091-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="ppc64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: amd64 stable wrt bug #812056Agostino Sarubbo2021-09-091-1/+1
| | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 RepoMan-Options: --include-arches="amd64" Signed-off-by: Agostino Sarubbo <ago@gentoo.org>
* sci-libs/gdal: Stabilize 3.3.1 ppc, #812056Sam James2021-09-081-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: Stabilize 3.3.1 arm64, #812056Sam James2021-09-081-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/netcdf-cxx: fix build with slibtoolSam James2021-09-082-0/+46
| | | | | | Closes: https://bugs.gentoo.org/778200 Thanks-to: orbea <orbea@riseup.net> Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/gdal: add 3.3.2Sam James2021-09-082-0/+313
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/mumps: new revision to fix more underlinking.Michael Orlitzky2021-09-071-0/+4
| | | | | | | | | | | | | When building without USE=mpi, the various lib*mumps libraries use LAPACK symbols without actually linking to liblapack. There are already a bunch of hacks in the mumps ebuild to work around these issues, so all I've done is add one more. As a simple test case, you can try to run the test suite for sci-libs/coinor-clp with USE="mumps metis", which now works. Closes: https://bugs.gentoo.org/777840 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/dealii: Drop 9.2.0-r1, cmake-utils--Andreas Sturmlechner2021-09-074-189/+0
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/indilib: Drop 1.8.8, 1.8.9 and 1.9.0Andreas Sturmlechner2021-09-074-171/+0
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/indilib: Stabilize 1.9.1-r1 ppc64, #806306Sam James2021-09-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: Stabilize 1.9.1-r1 ppc, #806306Sam James2021-09-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/indilib: Stabilize 1.9.1-r1 x86, #806306Sam James2021-09-071-1/+1
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/vtk: drop missing patchesAndrew Ammerlaan2021-09-051-9/+0
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/proj: add 8.1.1Sam James2021-09-052-0/+63
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/stellarsolver: 1.8 version bumpAndreas Sturmlechner2021-09-042-0/+28
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andreas Sturmlechner <asturm@gentoo.org>
* sci-libs/scikit-learn: keyword 0.24.2 for ~riscvMarek Szuba2021-09-021-2/+2
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/libcifpp: Drop oldPacho Ramos2021-09-024-88/+0
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/libcifpp: Bump to 1.1.1Pacho Ramos2021-09-022-0/+37
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/libcifpp: Add libcifpp for latest dssp versionsPacho Ramos2021-09-025-0/+95
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Pacho Ramos <pacho@gentoo.org>
* sci-libs/ginkgo: version bump to 1.4.0Matthias Maier2021-09-012-0/+56
| | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Matthias Maier <tamiko@gentoo.org>
* sci-libs/sktime: Remove last-rited packageJakov Smolić2021-08-303-51/+0
| | | | | | Closes: https://bugs.gentoo.org/792870 Closes: https://bugs.gentoo.org/790137 Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/rosetta-fragments: Remove last-rited packageJakov Smolić2021-08-305-286/+0
| | | | Signed-off-by: Jakov Smolić <jsmolic@gentoo.org>
* sci-libs/branca: fix depAlfredo Tupone2021-08-281-0/+1
| | | | | | Closes: https://bugs.gentoo.org/806148 Package-Manager: Portage-3.0.20, Repoman-3.0.2 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/branca: setuptools warnings detectedAlfredo Tupone2021-08-282-1/+15
| | | | | | Closes: https://bugs.gentoo.org/806076 Package-Manager: Portage-3.0.20, Repoman-3.0.2 Signed-off-by: Alfredo Tupone <tupone@gentoo.org>
* sci-libs/vtk: drop version 9.0.1Andrew Ammerlaan2021-08-272-562/+0
| | | | | Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/vtk: add version 9.0.3Andrew Ammerlaan2021-08-272-0/+562
| | | | | | Bug: https://bugs.gentoo.org/809209 Package-Manager: Portage-3.0.22, Repoman-3.0.3 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/rocSPARSE: bump version to 4.3.0YiyangWu2021-08-274-0/+186
| | | | | | | | | | Enable test and benchmark, although with minor issues. Closes: https://github.com/gentoo/gentoo/pull/22112/ Bug: https://github.com/ROCmSoftwarePlatform/rocSPARSE/issues/227 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocBLAS: Next generation BLAS implementation for ROCmYiyangWu2021-08-278-0/+367
| | | | | | | | | | | | | | | Migrated from ::science, rocBLAS is the core math libraries on ROCm platform for high performance computing on AMDGPU, dependency of MIOpen. Current version 4.3.0, support nearly all major AMD GPUs, especially for GCN, CDNA and RDNA2 (nightly) cards. Closes: https://bugs.gentoo.org/732952 Closes: https://bugs.gentoo.org/804181 Closes: https://github.com/gentoo/gentoo/pull/22065 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/rocPRIM: bump version to 4.3.0YiyangWu2021-08-273-0/+81
| | | | | | | | | | | | Enable src_test. Enable install benchmark exes as /usr/bin/rocPRIM_benchmark* Resolve GIT dependency error in this version Closes: https://bugs.gentoo.org/772173 Closes: https://github.com/gentoo/gentoo/pull/22111 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Signed-off-by: Benda Xu <heroxbd@gentoo.org>
* sci-libs/med: fix build against hdf5-1.12Bernd Waibel2021-08-252-2/+121
| | | | | | | | | | Thanks to Alexandre Ferreira for providing the patch. Closes: https://bugs.gentoo.org/809008 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Bernd Waibel <waebbl-gentoo@posteo.net> Closes: https://github.com/gentoo/gentoo/pull/22096 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-libs/profnet: Port to EAPI 7Jakov Smolic2021-08-221-5/+9
| | | | | | Closes: https://bugs.gentoo.org/731898 Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/profphd-utils: Port to EAPI 8Jakov Smolic2021-08-221-6/+4
| | | | | Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr> Signed-off-by: David Seifert <soap@gentoo.org>
* sci-libs/adolc: temporarily enforce CONFIG_SHELLSam James2021-08-202-2/+4
| | | | | | | | | While we have a dash patch already, it needs some more work and a bunch of our patches should really be upstreamed anyway. Need this for a dependency so this works for now. Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/adolc: move large patches to devspaceSam James2021-08-207-611/+16
| | | | Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/libqalculate: keyword 3.20.1-r1 for ~riscvAlex Fan2021-08-181-1/+1
| | | | | Signed-off-by: Alex Fan <alexfanqi@yahoo.com> Signed-off-by: Yixun Lan <dlan@gentoo.org>
* sci-libs/coinor-os: workaround build failure with GCC 11Sam James2021-08-171-4/+10
| | | | | | | | Not backporting the patches given they're large and awkward to rebase (they don't apply cleanly). Closes: https://bugs.gentoo.org/808793 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/symengine: fix build with Boost 1.77Sam James2021-08-172-0/+20
| | | | | Closes: https://bugs.gentoo.org/808057 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/fflas-ffpack: add a patch to disable test-fgesv.Michael Orlitzky2021-08-162-1/+39
| | | | | | | | This test is flaky; disable it with a patch for now. Closes: https://bugs.gentoo.org/807100 Package-Manager: Portage-3.0.20, Repoman-3.0.3 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/hdf5: add 1.12.1Marek Szuba2021-08-163-0/+222
| | | | Signed-off-by: Marek Szuba <marecki@gentoo.org>
* sci-libs/qd: new upstream version 2.3.23.Michael Orlitzky2021-08-1615-685/+42
| | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.2 Signed-off-by: Michael Orlitzky <mjo@gentoo.org>
* sci-libs/hdf5: keyworded 1.10.5-r1 for hppa, bug #804115Rolf Eike Beer2021-08-151-1/+1
| | | | | | | Package-Manager: Portage-3.0.20, Repoman-3.0.3 RepoMan-Options: --include-arches="hppa" Signed-off-by: Rolf Eike Beer <eike@sf-mail.de> Signed-off-by: Sam James <sam@gentoo.org>