From 22679d5bb1e6bf515d7e3098ab33c1b6b754d9ce Mon Sep 17 00:00:00 2001
From: Marek Szuba <marecki@gentoo.org>
Date: Mon, 10 Jun 2019 16:21:30 +0100
Subject: dev-perl/Bio-DB-HTS: bump to 3.01

Signed-off-by: Marek Szuba <marecki@gentoo.org>
Package-Manager: Portage-2.3.66, Repoman-2.3.11
---
 dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.11.ebuild |  2 +-
 dev-perl/Bio-DB-HTS/Bio-DB-HTS-3.01.ebuild | 31 ++++++++++++++++++++++++++++++
 dev-perl/Bio-DB-HTS/Manifest               |  1 +
 3 files changed, 33 insertions(+), 1 deletion(-)
 create mode 100644 dev-perl/Bio-DB-HTS/Bio-DB-HTS-3.01.ebuild

(limited to 'dev-perl')

diff --git a/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.11.ebuild b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.11.ebuild
index e5c23d67da05..75eb6798b945 100644
--- a/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.11.ebuild
+++ b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-2.11.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2018 Gentoo Foundation
+# Copyright 1999-2019 Gentoo Authors
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
diff --git a/dev-perl/Bio-DB-HTS/Bio-DB-HTS-3.01.ebuild b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-3.01.ebuild
new file mode 100644
index 000000000000..b5a23b3d1d51
--- /dev/null
+++ b/dev-perl/Bio-DB-HTS/Bio-DB-HTS-3.01.ebuild
@@ -0,0 +1,31 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+DIST_AUTHOR=AVULLO
+DIST_VERSION=3.01
+
+inherit perl-module
+
+DESCRIPTION="Perl bindings for sci-libs/htslib"
+
+LICENSE="Apache-2.0"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="test"
+
+RDEPEND="sci-biology/bioperl
+	sci-libs/htslib:="
+DEPEND="${RDEPEND}
+	dev-perl/Module-Build
+	test? ( dev-perl/Test-LeakTrace )"
+
+PATCHES=(
+	"${FILESDIR}/2.11-build_split_htslib_opts.patch"
+)
+
+src_configure() {
+	local myconf="--htslib-includedir=${EPREFIX}/usr/include/htslib --htslib-libdir=${EPREFIX}/usr/$(get_libdir)"
+	perl-module_src_configure
+}
diff --git a/dev-perl/Bio-DB-HTS/Manifest b/dev-perl/Bio-DB-HTS/Manifest
index 3eaf22e7a998..7cace7a20cf1 100644
--- a/dev-perl/Bio-DB-HTS/Manifest
+++ b/dev-perl/Bio-DB-HTS/Manifest
@@ -1 +1,2 @@
 DIST Bio-DB-HTS-2.11.tar.gz 5250814 BLAKE2B d77ccacebf339a33ab106b997139cdbf79f6c28269a832305e660b28370aca82b4c9824773acdbf8f59b18dd61f40346a9870578dba7b5b989b0f3bc9ad14b35 SHA512 114d90fe92b684250183b45b4d23d2dd45ecdcb2fa54f7b1c311ed668d8e87953adb861f709a0a48ff2b873ce777b21bc3b557bafa0df216b9a71b59facff6fd
+DIST Bio-DB-HTS-3.01.tar.gz 5250834 BLAKE2B ca7d3dfb6886460e7beee495eaa6857c912dc6bff24c1c8b888e7ada5ca736035af7ee48adeb5dd3b10204f99be4d0e2cb8d6350fa3e7bfe3fb1299e935ddc4e SHA512 4a464ffb300edf8ed8839c4d788a7c53d2a2cdc5abd675b8648d42e0b60f78b905dfb81cf1396daddbf2e279db2819df250117ecebdc3de5fdcb94a812182255
-- 
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