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| author |   Olivier Fisette <ribosome@gentoo.org> | 2004-12-14 00:49:03 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2004-12-14 00:49:03 +0000 |
| commit | e5edd4f47b22493e5abe0addbdf10a3eebce34b4 (patch) | |
| tree | 6a5be7da4d503fe43038f124eadbecdfb25db38e /app-sci | |
| parent | New version: 18.41. Added 18.40 to x86. (Manifest recommit) (diff) | |
| download | gentoo-2-e5edd4f47b22493e5abe0addbdf10a3eebce34b4.tar.gz gentoo-2-e5edd4f47b22493e5abe0addbdf10a3eebce34b4.tar.bz2 gentoo-2-e5edd4f47b22493e5abe0addbdf10a3eebce34b4.zip | |
New version: 412. Added 411 to x86.
Diffstat (limited to 'app-sci')
| -rw-r--r-- | app-sci/rebase/ChangeLog | 8 | ||||
| -rw-r--r-- | app-sci/rebase/Manifest | 14 | ||||
| -rw-r--r-- | app-sci/rebase/files/digest-rebase-412 | 1 | ||||
| -rw-r--r-- | app-sci/rebase/rebase-411.ebuild | 4 | ||||
| -rw-r--r-- | app-sci/rebase/rebase-412.ebuild | 35 |
5 files changed, 48 insertions, 14 deletions
diff --git a/app-sci/rebase/ChangeLog b/app-sci/rebase/ChangeLog index bcd496e1fc6f..2a2a5c94fca3 100644 --- a/app-sci/rebase/ChangeLog +++ b/app-sci/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for app-sci/rebase # Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.7 2004/11/20 23:38:28 sekretarz Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.8 2004/12/14 00:49:03 ribosome Exp $ + +*rebase-412 (13 Dec 2004) + + 13 Dec 2004; Olivier Fisette <ribosome@gentoo.org> rebase-411.ebuild, + +rebase-412.ebuild: + New version: 412. Added 411 to x86. 21 Nov 2004; Karol Wojtaszek <sekretarz@gentoo.org> rebase-411.ebuild: Keyworded ~amd64, bug #71858 diff --git a/app-sci/rebase/Manifest b/app-sci/rebase/Manifest index 12ba906a940e..52264fdc121d 100644 --- a/app-sci/rebase/Manifest +++ b/app-sci/rebase/Manifest @@ -1,16 +1,8 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -MD5 88e5bd8583ac82e967f8c4e8b96257c2 rebase-411.ebuild 1115 +MD5 761bf124df564aff0173fb6fe114e32a rebase-411.ebuild 1114 MD5 5be778dd567f4f354dac6cfdd983ecb6 rebase-409.ebuild 1106 MD5 1cdd5c9d8bb5b37bab23420900e037bb ChangeLog 1200 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 +MD5 91f7b8ad376754fecd89add47d5bc6e7 rebase-412.ebuild 1114 MD5 a23b7eeb77c447d4949727f5a083859c files/digest-rebase-409 63 MD5 04a9c29643e242bfdb170ef425f2a76e files/digest-rebase-411 63 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v1.2.6 (GNU/Linux) - -iD8DBQFBn9V9Z/iYVBmujdURAtJjAJ4qgy8WwmhRtlTWePHwpeTKLrLWawCfRXg+ -4fPvJyysPehDTuHLVO1UkeM= -=dxni ------END PGP SIGNATURE----- +MD5 c4f5461dd83ed5a1176a07a0786a6af7 files/digest-rebase-412 63 diff --git a/app-sci/rebase/files/digest-rebase-412 b/app-sci/rebase/files/digest-rebase-412 new file mode 100644 index 000000000000..c804b8ca3654 --- /dev/null +++ b/app-sci/rebase/files/digest-rebase-412 @@ -0,0 +1 @@ +MD5 3bedf4f6541926e663dd84dee00c9518 rebase-412.tar.bz2 177515 diff --git a/app-sci/rebase/rebase-411.ebuild b/app-sci/rebase/rebase-411.ebuild index f91213e3d9fb..440a7c0b1f6e 100644 --- a/app-sci/rebase/rebase-411.ebuild +++ b/app-sci/rebase/rebase-411.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2004 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-411.ebuild,v 1.2 2004/11/20 23:38:28 sekretarz Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-411.ebuild,v 1.3 2004/12/14 00:49:03 ribosome Exp $ DESCRIPTION="A restriction enzyme database" HOMEPAGE="http://${PN}.neb.com" @@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2" LICENSE="public-domain" SLOT="0" -KEYWORDS="~x86 ~ppc ~amd64" +KEYWORDS="x86 ~ppc ~amd64" IUSE="no-emboss no-rawdb" src_compile() { diff --git a/app-sci/rebase/rebase-412.ebuild b/app-sci/rebase/rebase-412.ebuild new file mode 100644 index 000000000000..c19103618ef6 --- /dev/null +++ b/app-sci/rebase/rebase-412.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2004 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-412.ebuild,v 1.1 2004/12/14 00:49:03 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://${PN}.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64" +IUSE="no-emboss no-rawdb" + +src_compile() { + # Index the database for use with emboss if emboss is installed and + # the user did not explicitly request not to index the database. + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + fi +} + +src_install() { + if ! use no-rawdb; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} + fi + newdoc REBASE.DOC README + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} + fi +} |