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author | Justin Lecher <jlec@gentoo.org> | 2013-03-11 15:02:36 +0000 |
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committer | Justin Lecher <jlec@gentoo.org> | 2013-03-11 15:02:36 +0000 |
commit | 4ffc9ee2f87e2e6730693cc4587dda8cc3c1faba (patch) | |
tree | b72d6f7dd8986fd0a55c1555e62291f99287b58a /sci-biology/clustalx | |
parent | sci-biology/diya: Drop Andrey as maintainer so that bugs get assigned to sci-... (diff) | |
download | gentoo-2-4ffc9ee2f87e2e6730693cc4587dda8cc3c1faba.tar.gz gentoo-2-4ffc9ee2f87e2e6730693cc4587dda8cc3c1faba.tar.bz2 gentoo-2-4ffc9ee2f87e2e6730693cc4587dda8cc3c1faba.zip |
sci-biology/clustalx: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly; drop old ebuild because of missing deps
(Portage version: 2.2.0_alpha166/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology/clustalx')
-rw-r--r-- | sci-biology/clustalx/ChangeLog | 7 | ||||
-rw-r--r-- | sci-biology/clustalx/clustalx-1.83-r2.ebuild | 63 | ||||
-rw-r--r-- | sci-biology/clustalx/metadata.xml | 6 |
3 files changed, 7 insertions, 69 deletions
diff --git a/sci-biology/clustalx/ChangeLog b/sci-biology/clustalx/ChangeLog index cbf5ca5d8896..13830d677d82 100644 --- a/sci-biology/clustalx/ChangeLog +++ b/sci-biology/clustalx/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/clustalx # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.28 2013/03/02 23:15:41 hwoarang Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.29 2013/03/11 15:02:36 jlec Exp $ + + 11 Mar 2013; Justin Lecher <jlec@gentoo.org> -clustalx-1.83-r2.ebuild, + metadata.xml: + Drop Andrey as maintainer so that bugs get assigned to sci-biology directly; + drop old ebuild because of missing deps 02 Mar 2013; Markos Chandras <hwoarang@gentoo.org> clustalx-2.1.ebuild: Move Qt dependencies to the new category diff --git a/sci-biology/clustalx/clustalx-1.83-r2.ebuild b/sci-biology/clustalx/clustalx-1.83-r2.ebuild deleted file mode 100644 index d0550de6cf78..000000000000 --- a/sci-biology/clustalx/clustalx-1.83-r2.ebuild +++ /dev/null @@ -1,63 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-1.83-r2.ebuild,v 1.11 2012/10/24 19:29:39 ulm Exp $ - -EAPI=1 - -inherit toolchain-funcs eutils - -DESCRIPTION="Graphical interface for the ClustalW multiple alignment program" -HOMEPAGE="http://www-igbmc.u-strasbg.fr/BioInfo/ClustalX/" -SRC_URI="ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/clustalx1.83.sun.tar.gz" -LICENSE="public-domain" - -SLOT="0" -KEYWORDS="~sparc" -IUSE="" - -DEPEND="sci-biology/clustalw:1 - sci-biology/ncbi-tools - >=x11-libs/motif-2.3:0 - x11-libs/libXpm" - -S="${WORKDIR}/${PN}${PV}.sun" - -pkg_setup() { - if ! built_with_use sci-biology/ncbi-tools X; then - echo - eerror "ClustalX requires the Vibrant toolkit, which is part of the" - eerror "optional X support in the \"sci-biology/ncbi-tools\" package." - eerror "To install ClustalX on your system, first recompile" - eerror "\"sci-biology/ncbi-tools\" with the \"X\" USE flag enabled," - eerror "then try to install ClustalX again." - die "X support not enabled in \"sci-biology/ncbi-tools\"" - fi -} - -src_unpack() { - unpack ${A} - cd "${S}" - cp makefile.linux makefile - sed -e "s/CC = cc/CC = $(tc-getCC)/" \ - -e "s/CFLAGS = -c -O/CFLAGS = -c ${CFLAGS}/" \ - -e "s/LFLAGS = -O -lm/LFLAGS = -lm ${CFLAGS}/" \ - -e "s%-I/usr/bio/src/ncbi/include%-I/usr/include/ncbi%" \ - -e "s%-L/usr/bio/src/ncbi/lib -L/usr/ccs/lib -L/usr/X11R6/lib%-L/usr/lib -L/usr/X11R6/lib%" \ - -i makefile || die - sed -i -e "s%clustalx_help%/usr/share/doc/${PF}/clustalx_help%" clustalx.c || die - sed -i -e "s%clustalw.doc%../clustalw.doc%" clustalx.html || die -} - -src_compile() { - make || die -} - -src_install() { - dobin clustalx - - dodoc README_X - dohtml clustalx.html - - insinto /usr/share/doc/${PF} - doins clustalx_help clustalw.doc -} diff --git a/sci-biology/clustalx/metadata.xml b/sci-biology/clustalx/metadata.xml index 3302123e5718..f17a827e3101 100644 --- a/sci-biology/clustalx/metadata.xml +++ b/sci-biology/clustalx/metadata.xml @@ -1,9 +1,5 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <maintainer> - <email>weaver@gentoo.org</email> - <name>Andrey Kislyuk</name> - </maintainer> - <herd>sci-biology</herd> + <herd>sci-biology</herd> </pkgmetadata> |