diff options
author | Justin Lecher <jlec@gentoo.org> | 2015-03-29 09:35:00 +0000 |
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committer | Justin Lecher <jlec@gentoo.org> | 2015-03-29 09:35:00 +0000 |
commit | 7db5595227350682c0ff86e89dabfb03becb2d1f (patch) | |
tree | 208bd8204c3e9d41441cc0d0a097de6cf0c80b4c /sci-biology/cutg | |
parent | Marked ~hppa (bug #544064). (diff) | |
download | gentoo-2-7db5595227350682c0ff86e89dabfb03becb2d1f.tar.gz gentoo-2-7db5595227350682c0ff86e89dabfb03becb2d1f.tar.bz2 gentoo-2-7db5595227350682c0ff86e89dabfb03becb2d1f.zip |
Drop old
(Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
Diffstat (limited to 'sci-biology/cutg')
-rw-r--r-- | sci-biology/cutg/ChangeLog | 6 | ||||
-rw-r--r-- | sci-biology/cutg/cutg-151.ebuild | 49 | ||||
-rw-r--r-- | sci-biology/cutg/cutg-160.ebuild | 50 |
3 files changed, 5 insertions, 100 deletions
diff --git a/sci-biology/cutg/ChangeLog b/sci-biology/cutg/ChangeLog index 6ec2a510fc9f..63ffdea51c0f 100644 --- a/sci-biology/cutg/ChangeLog +++ b/sci-biology/cutg/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/cutg # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/ChangeLog,v 1.61 2015/03/28 21:39:28 ago Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/ChangeLog,v 1.62 2015/03/29 09:35:00 jlec Exp $ + + 29 Mar 2015; Justin Lecher <jlec@gentoo.org> -cutg-151.ebuild, + -cutg-160.ebuild: + Drop old 28 Mar 2015; Agostino Sarubbo <ago@gentoo.org> cutg-160-r1.ebuild: Stable for ppc, wrt bug #542246 diff --git a/sci-biology/cutg/cutg-151.ebuild b/sci-biology/cutg/cutg-151.ebuild deleted file mode 100644 index 80c86e6f88fd..000000000000 --- a/sci-biology/cutg/cutg-151.ebuild +++ /dev/null @@ -1,49 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/cutg-151.ebuild,v 1.11 2011/08/09 15:36:16 xarthisius Exp $ - -DESCRIPTION="Codon usage tables calculated from GenBank" -HOMEPAGE="http://www.kazusa.or.jp/codon/" -SRC_URI="ftp://ftp.kazusa.or.jp/pub/codon/current/compressed/CUTG.${PV}.tar.gz" - -SLOT="0" -LICENSE="public-domain" -# Minimal build keeps only the indexed files (if applicable) and the -# documentation. The non-indexed database is not installed. -IUSE="emboss minimal" -KEYWORDS="amd64 ppc x86" - -DEPEND="emboss? ( sci-biology/emboss )" -RDEPEND="${DEPEND}" - -S="${WORKDIR}" - -RESTRICT="binchecks strip" - -src_compile() { - if use emboss; then - mkdir CODONS - echo - einfo "Indexing CUTG for usage with EMBOSS." - EMBOSS_DATA="." cutgextract -auto -directory "${S}" || die \ - "Indexing CUTG failed." - echo - fi -} - -src_install() { - if ! use minimal; then - mkdir -p "${D}"usr/share/${PN} - mv *.codon *.spsum "${D}"/usr/share/${PN} || die \ - "Installing raw CUTG database failed." - fi - dodoc README - if use emboss; then - mkdir -p "${D}"/usr/share/EMBOSS/data/CODONS - cd CODONS - for file in *; do - mv ${file} "${D}"/usr/share/EMBOSS/data/CODONS || die \ - "Installing the EMBOSS-indexed database failed." - done - fi -} diff --git a/sci-biology/cutg/cutg-160.ebuild b/sci-biology/cutg/cutg-160.ebuild deleted file mode 100644 index 7008d60b98fc..000000000000 --- a/sci-biology/cutg/cutg-160.ebuild +++ /dev/null @@ -1,50 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/cutg/cutg-160.ebuild,v 1.6 2011/08/09 15:36:16 xarthisius Exp $ - -EAPI="3" - -DESCRIPTION="Codon usage tables calculated from GenBank" -HOMEPAGE="http://www.kazusa.or.jp/codon/" -SRC_URI="mirror://gentoo/${P}.tar.bz2" - -SLOT="0" -LICENSE="public-domain" -# Minimal build keeps only the indexed files (if applicable) and the -# documentation. The non-indexed database is not installed. -IUSE="emboss minimal" -KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris" - -DEPEND="emboss? ( sci-biology/emboss )" -RDEPEND="${DEPEND}" - -RESTRICT="binchecks strip" - -src_compile() { - if use emboss; then - mkdir CODONS - echo - einfo "Indexing CUTG for usage with EMBOSS." - EMBOSS_DATA="." cutgextract -auto -directory "${S}" || die \ - "Indexing CUTG failed." - echo - fi -} - -src_install() { - if ! use minimal; then - mkdir -p "${ED}"usr/share/${PN} - mv *.codon *.spsum "${ED}"/usr/share/${PN} || die \ - "Installing raw CUTG database failed." - fi - dodoc README CODON_LABEL SPSUM_LABEL || die \ - "Failed to install documentation." - if use emboss; then - mkdir -p "${ED}"/usr/share/EMBOSS/data/CODONS - cd CODONS - for file in *; do - mv ${file} "${ED}"/usr/share/EMBOSS/data/CODONS || die \ - "Installing the EMBOSS-indexed database failed." - done - fi -} |