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author | 2010-11-07 20:41:37 +0000 | |
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committer | 2010-11-07 20:41:37 +0000 | |
commit | 3cea0aef645e4be44dc4e4ea1ee1a90c2179cac0 (patch) | |
tree | 2aa86b6d6eedc63a575141cac09c5c774d576449 /sci-biology/rmblast/rmblast-1.2.ebuild | |
parent | Set empty DEPEND wrt #344581 by Ulrich Müller. (diff) | |
download | gentoo-2-3cea0aef645e4be44dc4e4ea1ee1a90c2179cac0.tar.gz gentoo-2-3cea0aef645e4be44dc4e4ea1ee1a90c2179cac0.tar.bz2 gentoo-2-3cea0aef645e4be44dc4e4ea1ee1a90c2179cac0.zip |
New package, dependency of sci-biology/repeatmasker. Ebuild written by me
(Portage version: 2.2_rc86/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/rmblast/rmblast-1.2.ebuild')
-rw-r--r-- | sci-biology/rmblast/rmblast-1.2.ebuild | 50 |
1 files changed, 50 insertions, 0 deletions
diff --git a/sci-biology/rmblast/rmblast-1.2.ebuild b/sci-biology/rmblast/rmblast-1.2.ebuild new file mode 100644 index 000000000000..60ecccc15eed --- /dev/null +++ b/sci-biology/rmblast/rmblast-1.2.ebuild @@ -0,0 +1,50 @@ +# Copyright 1999-2010 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rmblast/rmblast-1.2.ebuild,v 1.1 2010/11/07 20:41:37 weaver Exp $ + +EAPI="3" + +inherit flag-o-matic toolchain-funcs + +MY_NCBI_BLAST_V=2.2.23+ + +DESCRIPTION="RepeatMasker compatible version of NCBI BLAST+" +HOMEPAGE="http://www.repeatmasker.org/RMBlast.html" +SRC_URI="http://www.repeatmasker.org/rmblast-${PV}-ncbi-blast-${MY_NCBI_BLAST_V}-src.tar.gz" + +LICENSE="OSL-2.1" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86" + +DEPEND="~dev-libs/boost-1.35.0" +RDEPEND="${DEPEND}" + +S="${WORKDIR}/${P}-ncbi-blast-${MY_NCBI_BLAST_V}-src/c++" + +src_install() { + einstall || die +} + +src_prepare() { + filter-ldflags -Wl,--as-needed + sed -i -e 's/-print-file-name=libstdc++.a//' \ + -e '/sed/ s/\([gO]\[0-9\]\)\*/\1\\+/' \ + src/build-system/configure || die +} + +src_configure() { + tc-export CXX CC + + "${S}"/configure --without-debug \ + --with-mt \ + --without-static \ + --with-dll \ + --prefix="${ED}"/opt/${PN} \ + --with-boost=/usr/include/boost-1_35/boost \ + || die +} + +src_install() { + emake install || die +} |