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author | Andrey Kislyuk <weaver@gentoo.org> | 2009-09-23 15:29:53 +0000 |
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committer | Andrey Kislyuk <weaver@gentoo.org> | 2009-09-23 15:29:53 +0000 |
commit | 4d419a58b7176aa536f10892b87d5cca6b4637e6 (patch) | |
tree | f6476529d7ce4b6f24f07cf1ee2c3c5ee97dcb5b /sci-biology | |
parent | Fix handling of USE="-berkdb". (diff) | |
download | gentoo-2-4d419a58b7176aa536f10892b87d5cca6b4637e6.tar.gz gentoo-2-4d419a58b7176aa536f10892b87d5cca6b4637e6.tar.bz2 gentoo-2-4d419a58b7176aa536f10892b87d5cca6b4637e6.zip |
Version bump
(Portage version: 2.2_rc30/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology')
-rw-r--r-- | sci-biology/biopython/ChangeLog | 7 | ||||
-rw-r--r-- | sci-biology/biopython/biopython-1.52.ebuild | 53 |
2 files changed, 59 insertions, 1 deletions
diff --git a/sci-biology/biopython/ChangeLog b/sci-biology/biopython/ChangeLog index 7e79a08d9b25..2d228924e8f2 100644 --- a/sci-biology/biopython/ChangeLog +++ b/sci-biology/biopython/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/biopython # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.36 2009/09/09 21:45:48 weaver Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/ChangeLog,v 1.37 2009/09/23 15:29:53 weaver Exp $ + +*biopython-1.52 (23 Sep 2009) + + 23 Sep 2009; Andrey Kislyuk <weaver@gentoo.org> +biopython-1.52.ebuild: + Version bump *biopython-1.51 (09 Sep 2009) diff --git a/sci-biology/biopython/biopython-1.52.ebuild b/sci-biology/biopython/biopython-1.52.ebuild new file mode 100644 index 000000000000..ef6deb2ec800 --- /dev/null +++ b/sci-biology/biopython/biopython-1.52.ebuild @@ -0,0 +1,53 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.52.ebuild,v 1.1 2009/09/23 15:29:53 weaver Exp $ + +EAPI="2" + +NEED_PYTHON=2.4 +inherit distutils eutils base + +DESCRIPTION="Biopython - Python modules for computational molecular biology" +LICENSE="as-is" +HOMEPAGE="http://www.biopython.org" +SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz" + +SLOT="0" +IUSE="mysql postgres" +KEYWORDS="~alpha ~amd64 ~ppc ~sparc ~x86" + +DEPEND="dev-python/numpy + >=dev-python/reportlab-2.0 + sys-devel/flex" + +RDEPEND="${DEPEND} + mysql? ( dev-python/mysql-python ) + postgres? ( dev-python/psycopg )" + +PATCHES=( + "${FILESDIR}"/${PN}-1.51-flex.patch +) + +src_compile() { + distutils_src_compile +} + +src_install() { + DOCS="CONTRIB DEPRECATED NEWS README" + distutils_src_install + + dodir "/usr/share/doc/${PF}" + cp -r Doc/* "${D}/usr/share/doc/${PF}/" || \ + die "Failed to install documentation." + dodir "/usr/share/${PN}" + rm -f Tests/*.pyc || \ + die "Failed to remove precompiled test files." + cp -r --preserve=mode Scripts Tests "${D}/usr/share/${PN}/" || \ + die "Failed to install shared files." +} + +src_test() { + cd "${S}/Tests" + PYTHONPATH="${PYTHONPATH}:${S}" \ + python run_tests.py --no-gui || die "Tests failed." +} |