Fix sandbox violation, #407311

(Portage version: 2.2.0_alpha90/cvs/Linux x86_64)

4 files changed, 25 insertions, 5 deletions

diff --git a/sci-chemistry/coot/ChangeLog b/sci-chemistry/coot/ChangeLog
index 957c8f24cffd..4bda510b5d15 100644
--- a/sci-chemistry/coot/ChangeLog
+++ b/sci-chemistry/coot/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-chemistry/coot
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.51 2012/03/06 15:31:19 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/ChangeLog,v 1.52 2012/03/07 19:33:39 jlec Exp $
+
+  07 Mar 2012; Justin Lecher <jlec@gentoo.org> coot-0.6.2.ebuild,
+  coot-0.6.2-r1.ebuild, coot-0.7_pre4040.ebuild:
+  Fix sandbox violation, #407311
 
 *coot-0.7_pre4040 (06 Mar 2012)
 
diff --git a/sci-chemistry/coot/coot-0.6.2-r1.ebuild b/sci-chemistry/coot/coot-0.6.2-r1.ebuild
index be31a70d7af9..5d608187faed 100644
--- a/sci-chemistry/coot/coot-0.6.2-r1.ebuild
+++ b/sci-chemistry/coot/coot-0.6.2-r1.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.6.2-r1.ebuild,v 1.3 2012/03/06 15:31:19 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.6.2-r1.ebuild,v 1.4 2012/03/07 19:33:39 jlec Exp $
 
 EAPI=3
 
@@ -88,6 +88,14 @@ PATCHES=(
 	"${FILESDIR}"/${PV}-libpng15.patch
 	)
 
+src_prepare() {
+	sed \
+		-e "s:AM_COOT_SYS_BUILD_TYPE:COOT_SYS_BUILD_TYPE=Gentoo-Linux-$(PYTHON)-gtk2 ; AC_MSG_RESULT([\$COOT_SYS_BUILD_TYPE]); AC_SUBST(COOT_SYS_BUILD_TYPE):g" \
+		-i configure.in || die
+
+	autotools-utils_src_prepare
+}
+
 src_configure() {
 	# All the --with's are used to activate various parts.
 	# Yes, this is broken behavior.
diff --git a/sci-chemistry/coot/coot-0.6.2.ebuild b/sci-chemistry/coot/coot-0.6.2.ebuild
index bd9066f1e5f6..427b9d35a441 100644
--- a/sci-chemistry/coot/coot-0.6.2.ebuild
+++ b/sci-chemistry/coot/coot-0.6.2.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2011 Gentoo Foundation
+# Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.6.2.ebuild,v 1.10 2011/10/08 16:22:59 phajdan.jr Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.6.2.ebuild,v 1.11 2012/03/07 19:33:39 jlec Exp $
 
 EAPI=3
 
@@ -85,6 +85,10 @@ PATCHES=(
 	)
 
 src_prepare() {
+	sed \
+		-e "s:AM_COOT_SYS_BUILD_TYPE:COOT_SYS_BUILD_TYPE=Gentoo-Linux-$(PYTHON)-gtk2 ; AC_MSG_RESULT([\$COOT_SYS_BUILD_TYPE]); AC_SUBST(COOT_SYS_BUILD_TYPE):g" \
+		-i configure.in || die
+
 	base_src_prepare
 
 	eautoreconf
diff --git a/sci-chemistry/coot/coot-0.7_pre4040.ebuild b/sci-chemistry/coot/coot-0.7_pre4040.ebuild
index 519ac27bad9f..2a7e3fccbfb3 100644
--- a/sci-chemistry/coot/coot-0.7_pre4040.ebuild
+++ b/sci-chemistry/coot/coot-0.7_pre4040.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2012 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.7_pre4040.ebuild,v 1.1 2012/03/06 15:31:19 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/coot/coot-0.7_pre4040.ebuild,v 1.2 2012/03/07 19:33:39 jlec Exp $
 
 EAPI=4
 
@@ -90,6 +90,10 @@ PATCHES=(
 	)
 
 src_prepare() {
+	sed \
+		-e "s:AM_COOT_SYS_BUILD_TYPE:COOT_SYS_BUILD_TYPE=Gentoo-Linux-$(PYTHON)-gtk2 ; AC_MSG_RESULT([\$COOT_SYS_BUILD_TYPE]); AC_SUBST(COOT_SYS_BUILD_TYPE):g" \
+		-i configure.in || die
+
 	autotools-utils_src_prepare
 
 	cat >> src/svn-revision.cc <<- EOF