dev-python/astropy: version bump

Package-Manager: Portage-2.3.3, Repoman-2.3.1

3 files changed, 84 insertions, 72 deletions

diff --git a/dev-python/astropy/files/astropy-1.1.2-cfitsio-338.patch b/dev-python/astropy/files/astropy-1.1.2-cfitsio-338.patch
deleted file mode 100644
index d4a8fa072c5d..000000000000
--- a/dev-python/astropy/files/astropy-1.1.2-cfitsio-338.patch
+++ /dev/null
@@ -1,35 +0,0 @@
-Author: Ole Streicher <olebole@debian.org>
-Description: Make TFORMx check more flexible
- The maximal column length in cfitsio changed between version 3370 and 3380.
- This patch checks their syntax, without a specific length.
-Bug: https://github.com/astropy/astropy/issues/4646
---- a/astropy/io/fits/tests/test_image.py
-+++ b/astropy/io/fits/tests/test_image.py
-@@ -4,6 +4,7 @@
- 
- import math
- import os
-+import re
- import time
- import warnings
- 
-@@ -1010,7 +1011,7 @@
-         hdu.writeto(self.temp('test.fits'))
- 
-         with fits.open(self.temp('test.fits')) as hdul:
--            assert (hdul['SCI'].data == cube).all()
-+            assert np.abs(hdul['SCI'].data - cube).max() < 1./15.
- 
-     def test_subtractive_dither_seed(self):
-         """
-@@ -1265,8 +1266,8 @@
- 
-         with fits.open(self.temp('test.fits'),
-                        disable_image_compression=True) as h:
--            assert h[1].header['TFORM1'] == '1PB(30)'
--            assert h[1].header['TFORM2'] == '1PB(359)'
-+            assert re.match(r'^1PB\(\d+\)$', h[1].header['TFORM1'])
-+            assert re.match(r'^1PB\(\d+\)$', h[1].header['TFORM2'])
- 
-     def test_compression_update_header(self):
-         """Regression test for
diff --git a/dev-python/astropy/files/astropy-1.1.2-fix-for-pytest-28.patch b/dev-python/astropy/files/astropy-1.1.2-fix-for-pytest-28.patch
deleted file mode 100644
index 0d62e9c963a4..000000000000
--- a/dev-python/astropy/files/astropy-1.1.2-fix-for-pytest-28.patch
+++ /dev/null
@@ -1,37 +0,0 @@
-From e904df784b91fd45e7dfcdec0713c471bb03efff Mon Sep 17 00:00:00 2001
-From: Thomas Robitaille <thomas.robitaille@gmail.com>
-Date: Fri, 1 Jan 2016 19:36:39 +0000
-Bug: https://bugs.debian.org/812648
-Bug: https://github.com/astropy/astropy/pull/4349
-Subject: [PATCH] Fixes to pytest plugins for pytest >= 2.8.0
---- a/astropy/tests/pytest_plugins.py
-+++ b/astropy/tests/pytest_plugins.py
-@@ -161,7 +161,10 @@
-         # handling __doctest_skip__) doesn't happen.
-         def collect(self):
-             if self.fspath.basename == "conftest.py":
--                module = self.config._conftest.importconftest(self.fspath)
-+                try:
-+                    module = self.config._conftest.importconftest(self.fspath)
-+                except AttributeError:  # pytest >= 2.8.0
-+                    module = self.config.pluginmanager._importconftest(self.fspath)
-             else:
-                 try:
-                     module = self.fspath.pyimport()
-@@ -191,8 +194,14 @@
-         def runtest(self):
-             # satisfy `FixtureRequest` constructor...
-             self.funcargs = {}
--            self._fixtureinfo = doctest_plugin.FuncFixtureInfo((), [], {})
--            fixture_request = doctest_plugin.FixtureRequest(self)
-+            try:
-+                self._fixtureinfo = doctest_plugin.FuncFixtureInfo((), [], {})
-+                fixture_request = doctest_plugin.FixtureRequest(self)
-+            except AttributeError:  # pytest >= 2.8.0
-+                python_plugin = config.pluginmanager.getplugin('python')
-+                self._fixtureinfo = python_plugin.FuncFixtureInfo((), [], {})
-+                fixture_request = python_plugin.FixtureRequest(self)
-+
-             failed, tot = doctest.testfile(
-                 str(self.fspath), module_relative=False,
-                 optionflags=opts, parser=DocTestParserPlus(),
diff --git a/dev-python/astropy/files/astropy-1.3-mark-known-failures.patch b/dev-python/astropy/files/astropy-1.3-mark-known-failures.patch
new file mode 100644
index 000000000000..1a30bc1d10ab
--- /dev/null
+++ b/dev-python/astropy/files/astropy-1.3-mark-known-failures.patch
@@ -0,0 +1,84 @@
+From: Ole Streicher <olebole@debian.org>
+Date: Tue, 13 Dec 2016 09:41:39 +0100
+Subject: Mark all known test failures as xfail. These failures have been
+ discussed with upstream.
+
+---
+ astropy/table/tests/test_info.py                                      | 4 +++-
+ astropy/tests/tests/test_socketblocker.py                             | 4 ++--
+ astropy/visualization/wcsaxes/tests/test_display_world_coordinates.py | 4 ++++
+ astropy/vo/samp/tests/test_standard_profile.py                        | 2 ++
+ 4 files changed, 11 insertions(+), 3 deletions(-)
+
+diff --git a/astropy/table/tests/test_info.py b/astropy/table/tests/test_info.py
+index 2bbcc7a..50fbdb4 100644
+--- a/astropy/table/tests/test_info.py
++++ b/astropy/table/tests/test_info.py
+@@ -8,6 +8,7 @@ from collections import OrderedDict
+ 
+ import numpy as np
+ 
++from ...tests.helper import pytest
+ from ...extern import six
+ from ...extern.six.moves import cStringIO as StringIO
+ from ... import units as u
+@@ -229,7 +230,8 @@ def test_class_attribute():
+         t.info(out=out)
+         assert out.getvalue().splitlines() == exp
+ 
+-
++# see https://github.com/astropy/astropy/issues/4336
++@pytest.mark.xfail()
+ def test_ignore_warnings():
+     t = table.Table([[np.nan, np.nan]])
+     with warnings.catch_warnings(record=True) as warns:
+diff --git a/astropy/tests/tests/test_socketblocker.py b/astropy/tests/tests/test_socketblocker.py
+index c362fa5..783defe 100644
+--- a/astropy/tests/tests/test_socketblocker.py
++++ b/astropy/tests/tests/test_socketblocker.py
+@@ -66,8 +66,8 @@ PY3_4 = sys.version_info[:2] >= (3, 4)
+ def _square(x):
+     return x ** 2
+ 
+-
+-@pytest.mark.skipif('not PY3_4 or sys.platform == "win32" or sys.platform.startswith("gnu0")')
++# see https://github.com/astropy/astropy/issues/4193
++@pytest.mark.skipif(True, reason="Blocks on Debian CI test")
+ def test_multiprocessing_forkserver():
+     """
+     Test that using multiprocessing with forkserver works.  Perhaps
+diff --git a/astropy/visualization/wcsaxes/tests/test_display_world_coordinates.py b/astropy/visualization/wcsaxes/tests/test_display_world_coordinates.py
+index 53436dd..4c710e7 100644
+--- a/astropy/visualization/wcsaxes/tests/test_display_world_coordinates.py
++++ b/astropy/visualization/wcsaxes/tests/test_display_world_coordinates.py
+@@ -3,6 +3,8 @@ from ..core import WCSAxes
+ import matplotlib.pyplot as plt
+ from matplotlib.backend_bases import KeyEvent
+ 
++import pytest
++
+ from ....wcs import WCS
+ from ....extern import six
+ from ....coordinates import FK5
+@@ -93,6 +95,8 @@ class TestDisplayWorldCoordinate(BaseImageTests):
+ 
+         assert string_world5 == six.u('267.652 -28\xb046\'23" (world, overlay 3)')
+ 
++    # See https://github.com/astropy/astropy/issues/5601
++    @pytest.mark.xfail()
+     def test_cube_coords(self, tmpdir):
+         wcs = WCS(self.cube_header)
+ 
+diff --git a/astropy/vo/samp/tests/test_standard_profile.py b/astropy/vo/samp/tests/test_standard_profile.py
+index 325ac96..ac25e55 100644
+--- a/astropy/vo/samp/tests/test_standard_profile.py
++++ b/astropy/vo/samp/tests/test_standard_profile.py
+@@ -62,6 +62,8 @@ class TestStandardProfile(object):
+ 
+         self.hub.stop()
+ 
++    # see https://github.com/astropy/astropy/issues/5460
++    @pytest.mark.skipif(True, reason="Setup fails due to SSL problems")
+     def test_main(self):
+ 
+         self.client1_id = self.client1.get_public_id()