diff options
| author |   David Seifert <soap@gentoo.org> | 2020-08-16 22:49:52 +0200 |
|---|---|---|
| committer | David Seifert <soap@gentoo.org> | 2020-08-16 22:49:52 +0200 |
| commit | e242a698ff6c378fa19286f02c735606e6a66fd6 (patch) | |
| tree | d2d0f49b89cd19fbabd08d0388226b018fdb9b48 /sci-biology | |
| parent | sci-biology/bedtools: Version bump to 2.29.2 (diff) | |
| download | gentoo-e242a698ff6c378fa19286f02c735606e6a66fd6.tar.gz gentoo-e242a698ff6c378fa19286f02c735606e6a66fd6.tar.bz2 gentoo-e242a698ff6c378fa19286f02c735606e6a66fd6.zip | |
sci-biology/bedtools: Remove old
Closes: https://bugs.gentoo.org/718468
Package-Manager: Portage-3.0.2, Repoman-2.3.23
Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bedtools/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/bedtools/bedtools-2.26.0.ebuild | 44 |
2 files changed, 0 insertions, 46 deletions
diff --git a/sci-biology/bedtools/Manifest b/sci-biology/bedtools/Manifest index d776ef0925aa..5dc912159a45 100644 --- a/sci-biology/bedtools/Manifest +++ b/sci-biology/bedtools/Manifest @@ -1,3 +1 @@ -DIST bedtools-2.26.0-fix-buildsystem.patch.bz2 2584 BLAKE2B 550cd03a0c01217adb347587cb75bdc2ffa4e03ad6ad66535b22d423e6f030e237b0ccfd3d1bd3e434cb9cc2a007971517f03e9ceabc08b63c725bac786e23e8 SHA512 0a7835f560102ce6183736faea6a2be05609b69bb8efdaf98b9d7057e24aa1ebe9d6067118b95c76470ca341b151970db532094ee70ca333075aed7c47509ba3 -DIST bedtools-2.26.0.tar.gz 19939711 BLAKE2B 8f6ee6ed755c638dbdd0a4750a5348c28a865f36eaafef6160e90f62912cb0a6b719713935ba68dad74bc591e3f37db49eab54a06a316dc00e4ec82a5dca71dc SHA512 b224adcc09322e90ef389e8172e14572b68f164185fe1a8814db1c47bb4f15656ca8c0ff0061017eb54d76affbe0d0f5793d893b8ab489b56eaf0818616a5def DIST bedtools-2.29.2.tar.gz 20646485 BLAKE2B cdfff7a0f5300f31c2487e98bd28dc7e8b7f3575a098947c2c7b3a6e30272a80d35f07997d3a00bd42d91bf60899f32358b25b054b6f40b761cc66e2788508b3 SHA512 138ff029995e9889d2e43f884fa15bb5614d11cf75dfe18e2999aad0915e80f49444e67c9934c92ca8e28caad399394b493db8a1bee9f5304413a8c41c22c6d5 diff --git a/sci-biology/bedtools/bedtools-2.26.0.ebuild b/sci-biology/bedtools/bedtools-2.26.0.ebuild deleted file mode 100644 index b062a6fef84d..000000000000 --- a/sci-biology/bedtools/bedtools-2.26.0.ebuild +++ /dev/null @@ -1,44 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python3_6 ) - -inherit flag-o-matic python-any-r1 toolchain-funcs - -DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, SAM/BAM file formats" -HOMEPAGE="https://bedtools.readthedocs.io/" -SRC_URI="https://github.com/arq5x/${PN}2/releases/download/v${PV}/${P}.tar.gz - https://dev.gentoo.org/~mgorny/dist/${PN}-2.26.0-fix-buildsystem.patch.bz2" - -LICENSE="GPL-2" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="test" -RESTRICT="!test? ( test )" - -DEPEND="${PYTHON_DEPS} - test? ( - sci-libs/htslib - sci-biology/samtools:0 - )" -RDEPEND="sys-libs/zlib" - -S="${WORKDIR}/${PN}2" - -DOCS=( README.md RELEASE_HISTORY ) -PATCHES=( "${WORKDIR}/${PN}-2.26.0-fix-buildsystem.patch" ) - -src_configure() { - append-lfs-flags - export prefix="${EPREFIX}/usr" - tc-export AR CXX -} - -src_install() { - default - - insinto /usr/share/${PN} - doins -r genomes -} |