sci-mathematics/nauty: drop 2.8.6-r1

Signed-off-by: Michael Orlitzky <mjo@gentoo.org>

3 files changed, 0 insertions, 218 deletions

diff --git a/sci-mathematics/nauty/Manifest b/sci-mathematics/nauty/Manifest
index de80d1d6f226..966e6107ac8f 100644
--- a/sci-mathematics/nauty/Manifest
+++ b/sci-mathematics/nauty/Manifest
@@ -1,5 +1,3 @@
 DIST nauty-includes.patch 2530 BLAKE2B 8789bc2f65b89aa3bbf27e517f1c56340f9bde089ef54aa28757c66c3954b5c54e8a09b6989ad8d57098970240dd1838baa0003766fe10c7f6c32041abf461e3 SHA512 d11f530fecb86edc9e95f0b4d91240778047c0e84d6259c80490358baf0a3eeaa112acfe1fcdb594da6c6e17855f5e21cb75c88446b8d6d9e96402be0e5e6af2
-DIST nauty2_8_6.tar.gz 1546765 BLAKE2B be8aa8ef816c8833a79876e6bf99b0dc4a23922f48684c8a3272c01b0b4eb64959366cae363fbda4200354a0833942b64e85c009fc35a3d6fa02f9b74c9b9a74 SHA512 9bc597d4341a6a67aece0ad95ecd4a649f675def73e97af1d215cf7399cbd3fb8e39f140cbd6f69740f2083c7a5739d5089e746bb3f831250709e0d2b43548b5
 DIST nauty2_8_8.tar.gz 2302360 BLAKE2B 4a37b345b239de11948d180f306e984dfec4aa26eb2720d0f0f09acd120a60b4f678375baa10d3f64f3e2f501c35cbfa58e10fc44252eb7b952a1592727a3b7f SHA512 c0495256b92b0742e7f0a3ad8b43f400e7b4bc4b58dff560e7d0a868f392b0462424566b8ebba5ec08499551eab091b6a8e2c0ddba4953ab7592906034812c18
-DIST nauty_2.8.6+ds-1.debian.tar.xz 62852 BLAKE2B fcbbed54b10d9dd4bdf82d8a72ef91866a235c7679266b8f395e2fe6b44a679e98f85462a42037094d856130d5456d9989749c416932f895bc17df8ef32241a2 SHA512 3784e0ec15c64ea6850f9198c61af3924fcedf1ffa4715fbd53a9bd1cd7defd69b543a8d4e6d46ef727918661409e2de77c89c3ca79f36769c1335b30bdd305c
 DIST nauty_2.8.8+ds-1.debian.tar.xz 65176 BLAKE2B 3615819098169caf1648271c0725e146c87ab794776c02f5bd77b7092a2c1d9b93d663ef4a9cf027fda956d40f24bb99a909f89a4564b99429b67f781d39cfc2 SHA512 f81aa3c4a142c4efa5ce97c241f95cba9916d49f02c2b3dfbd76227f2db20ec5e2a3ebe371c5748681fc3492df9ff9bca2456d76e1c70e435aa5baf1522391d5
diff --git a/sci-mathematics/nauty/files/nauty-2.8.6-gentreeg-gentourng.patch b/sci-mathematics/nauty/files/nauty-2.8.6-gentreeg-gentourng.patch
deleted file mode 100644
index 322b25326ee0..000000000000
--- a/sci-mathematics/nauty/files/nauty-2.8.6-gentreeg-gentourng.patch
+++ /dev/null
@@ -1,144 +0,0 @@
-From edb0474a4db8e69f971e4eebe18716309f5a7bb3 Mon Sep 17 00:00:00 2001
-From: Michael Orlitzky <michael@orlitzky.com>
-Date: Tue, 17 Jan 2023 19:44:49 -0500
-Subject: [PATCH 1/1] Upstream fixes for gentreeg and gentourng.
-
-https://mailman.anu.edu.au/pipermail/nauty/2023-January/000903.html
----
- gentourng.c |  2 +-
- gentreeg.c  | 95 ++++++++++++++++++++++++++++-------------------------
- 2 files changed, 51 insertions(+), 46 deletions(-)
-
-diff --git a/gentourng.c b/gentourng.c
-index 634e5e8..5c7ffff 100644
---- a/gentourng.c
-+++ b/gentourng.c
-@@ -1408,7 +1408,7 @@ PLUGIN_INIT
-                 (*outproc)(outfile,g,1);
-             }
-         }
--        else
-+        else if (!connec || maxn != 2)
-         {
-             makeleveldata();
- 
-diff --git a/gentreeg.c b/gentreeg.c
-index 946d5f8..15bf87b 100644
---- a/gentreeg.c
-+++ b/gentreeg.c
-@@ -1,4 +1,4 @@
--/* gentree version 1.3; Brendan McKay Oct 2022 */
-+/* gentree version 1.4; Brendan McKay Dec 2022 */
- /* This program is a wrapper for the program FreeTrees.c written
-  * by Gang Li & Frank Ruskey.  See below for their original
-  * comments. */
-@@ -32,49 +32,54 @@ Counts for n=1..45:
-  1: 1
-  2: 1
-  3: 1
-- 4: 1
-- 5: 2
-- 6: 3
-- 7: 6
-- 8: 11
-- 9: 23
--10: 47
--11: 106
--12: 235
--13: 551
--14: 1301
--15: 3159
--16: 7741
--17: 19320
--18: 48629
--19: 123867
--20: 317955
--21: 823065
--22: 2144505
--23: 5623756
--24: 14828074
--25: 39299897
--26: 104636890
--27: 279793450
--28: 751065460
--29: 2023443032
--30: 5469566585
--31: 14830871802
--32: 40330829030
--33: 109972410221
--34: 300628862480
--35: 823779631721
--36: 2262366343746
--37: 6226306037178
--38: 17169677490714
--39: 47436313524262
--40: 131290543779126
--41: 363990257783343
--42: 1010748076717151
--43: 2810986483493475
--44: 7828986221515605
--45: 21835027912963086
--********************************/
-+ 4: 2
-+ 5: 3
-+ 6: 6
-+ 7: 11
-+ 8: 23
-+ 9: 47
-+10: 106
-+11: 235
-+12: 551
-+13: 1301
-+14: 3159
-+15: 7741
-+16: 19320
-+17: 48629
-+18: 123867
-+19: 317955
-+20: 823065
-+21: 2144505
-+22: 5623756
-+23: 14828074
-+24: 39299897
-+25: 104636890
-+26: 279793450
-+27: 751065460
-+28: 2023443032
-+29: 5469566585
-+30: 14830871802
-+31: 40330829030
-+32: 109972410221
-+33: 300628862480
-+34: 823779631721
-+35: 2262366343746
-+36: 6226306037178
-+37: 17169677490714
-+38: 47436313524262
-+39: 131290543779126
-+40: 363990257783343
-+41: 1010748076717151
-+42: 2810986483493475
-+43: 7828986221515605
-+44: 21835027912963086
-+45: 60978390985918906
-+46: 170508699155987862
-+47: 477355090753926460
-+48: 1337946100045842285
-+49: 3754194185716399992
-+50: 10545233702911509534
-+*******************************/
- 
- /* Comments on original program by original authors */
- /*==============================================================*/
-@@ -676,7 +681,7 @@ PLUGIN_INIT
-         }
-         else if (nv == 2)
-         {
--            if (res == 0 && maxdeg >= 1 && mindiam <= 1 && maxdiam >= 2)
-+            if (res == 0 && maxdeg >= 1 && mindiam <= 1 && maxdiam >= 1)
-             {
-                 par[1] = 0;
-                 par[2] = 1;
--- 
-2.38.2
-
diff --git a/sci-mathematics/nauty/nauty-2.8.6-r1.ebuild b/sci-mathematics/nauty/nauty-2.8.6-r1.ebuild
deleted file mode 100644
index 680f026d9f50..000000000000
--- a/sci-mathematics/nauty/nauty-2.8.6-r1.ebuild
+++ /dev/null
@@ -1,72 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-inherit autotools
-
-MY_PV=${PV//./_}
-DEBIAN_PATCH_VERSION=1
-
-DESCRIPTION="Computing automorphism groups of graphs and digraphs"
-HOMEPAGE="https://pallini.di.uniroma1.it/"
-
-SRC_URI="https://pallini.di.uniroma1.it/${PN}${MY_PV}.tar.gz
-	mirror://debian/pool/main/${PN:0:1}/${PN}/${PN}_${PV}+ds-${DEBIAN_PATCH_VERSION}.debian.tar.xz
-	https://src.fedoraproject.org/rpms/nauty/raw/f35/f/nauty-includes.patch"
-
-LICENSE="Apache-2.0"
-SLOT="0"
-KEYWORDS="amd64 ~arm ~riscv ~x86"
-IUSE="cpu_flags_x86_popcnt examples"
-
-BDEPEND="sys-apps/help2man"
-DEPEND="dev-libs/gmp:0
-	sys-libs/zlib
-	sci-mathematics/cliquer"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}${MY_PV}"
-
-DOCS=( schreier.txt formats.txt changes24-28.txt )
-
-PATCHES=(
-	"${FILESDIR}/${P}-gentreeg-gentourng.patch"
-	"${WORKDIR}/debian/patches/upstream-fix-gt_numorbits.patch"
-	"${WORKDIR}/debian/patches/upstream-C2help2man.patch"
-	"${WORKDIR}/debian/patches/upstream-autotoolization.patch"
-	"${DISTDIR}/nauty-includes.patch"
-	"${WORKDIR}/debian/patches/unbundle-cliquer.patch"
-	"${WORKDIR}/debian/patches/upstream-zlib-dimacs2g.patch"
-	"${WORKDIR}/debian/patches/fall-off.patch"
-	"${WORKDIR}/debian/patches/format.patch"
-)
-
-src_prepare() {
-	default
-	rm makefile || die
-
-	# The debian patch looks for <cliquer.h>, but the autotools-form of
-	# cliquer installs that header as <cliquer/cliquer.h>.
-	sed -e 's~<cliquer\.h>~<cliquer/cliquer\.h>~' -i nautycliquer.h || die
-
-	eautoreconf
-}
-
-src_configure() {
-	econf --disable-static \
-		  --enable-tls \
-		  --enable-generic \
-		  $(use_enable cpu_flags_x86_popcnt popcnt)
-}
-
-src_install() {
-	default
-
-	if use examples; then
-		docinto examples
-		dodoc nautyex*.c
-	fi
-
-	find "${ED}" -name '*.la' -delete || die
-}