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path: root/sci-biology
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* sci-biology/poa: [QA] inherit toolchain-funcs.eclass directlyDavid Seifert2020-02-131-2/+2
* */*: Bump copyright on files touched this yearMichał Górny2020-02-111-1/+1
* sci-biology/pysam: Remove py2Michał Górny2020-02-111-1/+1
* sci-biology/bedtools: Remove py2 where possibleMichał Górny2020-02-101-1/+1
* sci-biology/tophat: Switch to PYTHON_MULTI_USEDEP APIMichał Górny2020-02-091-3/+5
* sci-biology/bcftools: Switch to PYTHON_MULTI_USEDEP APIMichał Górny2020-02-091-1/+3
* sci-biology/bcftools: fix PYTHON_COMPAT, add missing matplotlib depMartin Mokrejs2020-02-072-4/+14
* */*: Drop stable alpha keywordsMatt Turner2020-01-251-1/+1
* sci-biology/bwa: Fix -fno-common bugDavid Seifert2020-01-252-4/+13
* sci-biology/HTSeq: Remove Python 2Michał Górny2020-01-162-2/+2
* sci-biology/biopandas: Remove Python 2Michał Górny2020-01-161-1/+1
* */*: Switch sci-biology proj to cmake.eclassAndreas Sturmlechner2020-01-052-6/+6
* */*: Clean PYTHON_COMPAT of obsolete implsMichał Górny2020-01-056-12/+12
* sci-biology/biopython: Drop python2_7Andreas Sturmlechner2019-12-291-2/+1
* sci-biology/biopython: Remove oldDavid Seifert2019-12-293-114/+0
* sci-biology/embassy-phylipnew: Change LICENSE to "free-noncomm".Ulrich Müller2019-12-281-2/+2
* sci-biology/phylip: Change LICENSE to "free-noncomm".Ulrich Müller2019-12-281-2/+2
* sci-biology/embassy: Fix LICENSE.Ulrich Müller2019-12-241-2/+2
* sci-biology/gatk: Drop broken -9999Michał Górny2019-12-151-40/+0
* sci-biology/bioperl-run: Drop unmaintained -9999Michał Górny2019-12-151-40/+0
* sci-biology/bioperl-network: Drop unmaintained -9999Michał Górny2019-12-151-31/+0
* sci-biology/bioperl-db: Drop unmaintained -9999Michał Górny2019-12-151-37/+0
* sci-biology/bioperl: Drop unmaintained -9999Michał Górny2019-12-151-73/+0
* */*: [QA] Remove redundant `|| die` guardsDavid Seifert2019-12-116-9/+9
* sci-biology/shrimp: Remove oldDavid Seifert2019-12-112-55/+0
* sci-biology/velvet: Port to EAPI 7David Seifert2019-12-113-126/+0
* sci-biology/augustus: Port to EAPI 7David Seifert2019-12-111-9/+10
* sci-biology/tree-puzzle: Port to EAPI 7David Seifert2019-12-111-21/+18
* sci-biology/mrbayes: Remove oldDavid Seifert2019-12-111-51/+0
* sci-biology/plink: Remove oldDavid Seifert2019-12-115-164/+0
* sci-biology/last: Remove oldDavid Seifert2019-12-112-40/+0
* sci-biology/gibbs: Port to EAPI 7David Seifert2019-12-112-18/+27
* sci-biology/glimmerhmm: Port to EAPI 7David Seifert2019-12-112-17/+34
* */*: [QA] Fix trivial cases of MissingTestRestrictMichał Górny2019-12-1113-11/+24
* sci-biology/mcl: drop old EAPIAaron Bauman2019-11-233-74/+0
* sci-biology/psipred: drop old EAPIAaron Bauman2019-11-233-107/+0
* sci-biology/ariadne: drop last-rited packageAaron Bauman2019-11-205-100/+0
* sci-biology/bamtools: Remove USE="static-libs"David Seifert2019-11-132-60/+6
* sci-biology/goby-cpp: Remove last-rited pkgMichał Górny2019-10-145-104/+0
* */*: Remove mirror://gentoo rename hackMichał Górny2019-10-051-1/+1
* sci-biology/ApE: Add bindist restrictionMichał Górny2019-09-191-2/+2
* Make a bunch of metadata.xml files uniformMatt Turner2019-09-151-1/+1
* sci-biology/goby: Remove last-rited pkgMichał Górny2019-09-144-127/+0
* sci-biology/bioruby: amd64 stable wrt bug #690048Agostino Sarubbo2019-09-081-1/+1
* sci-biology/bioruby: x86 stable (bug #690048)Thomas Deutschmann2019-09-071-1/+1
* sci-biology/stride: Port to EAPI 7David Seifert2019-08-173-25/+31
* sci-biology/stride: [QA] Version the distfileDavid Seifert2019-08-172-3/+3
* sci-biology/sim4: [QA] Version the distfileDavid Seifert2019-08-172-4/+4
* sci-biology/vaal: remove last rited packageMikle Kolyada2019-07-224-72/+0
* sci-biology/allpathslg: remove last rited packageMikle Kolyada2019-07-224-69/+0