Import from Science overlay

Package-Manager: portage-2.2_rc30/cvs/Linux x86_64

3 files changed, 54 insertions, 0 deletions

diff --git a/sci-biology/piler/ChangeLog b/sci-biology/piler/ChangeLog
new file mode 100644
index 000000000000..febfd2d46abc
--- /dev/null
+++ b/sci-biology/piler/ChangeLog
@@ -0,0 +1,13 @@
+# ChangeLog for sci-biology/piler
+# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/piler/ChangeLog,v 1.1 2009/07/25 18:15:30 weaver Exp $
+
+*piler-1.0 (25 Jul 2009)
+
+  25 Jul 2009; Andrey Kislyuk <weaver@gentoo.org> +metadata.xml,
+  +piler-1.0.ebuild:
+  Import from Science overlay
+
+  18 Feb 2009; weaver <weaver@gentoo.org> ChangeLog:
+  New package sci-biology/piler, ebuild written by me
+
diff --git a/sci-biology/piler/metadata.xml b/sci-biology/piler/metadata.xml
new file mode 100644
index 000000000000..3302123e5718
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+++ b/sci-biology/piler/metadata.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer>
+		<email>weaver@gentoo.org</email>
+		<name>Andrey Kislyuk</name>
+	</maintainer>
+	<herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/piler/piler-1.0.ebuild b/sci-biology/piler/piler-1.0.ebuild
new file mode 100644
index 000000000000..674cd82f6af9
--- /dev/null
+++ b/sci-biology/piler/piler-1.0.ebuild
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+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/piler/piler-1.0.ebuild,v 1.1 2009/07/25 18:15:30 weaver Exp $
+
+EAPI="2"
+
+inherit toolchain-funcs
+
+DESCRIPTION="Analysis of repetitive DNA found in genome sequences"
+HOMEPAGE="http://www.drive5.com/piler/"
+#SRC_URI="http://www.drive5.com/piler/piler_source.tar.gz"
+SRC_URI="mirror://gentoo/${P}.tar.gz"
+
+LICENSE="public-domain"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+DEPEND=""
+RDEPEND="|| ( sci-biology/muscle
+	sci-libs/libmuscle )
+	sci-biology/pals"
+
+S="${WORKDIR}"
+
+src_compile() {
+	emake GPP="$(tc-getCXX)" CFLAGS="${CXXFLAGS}" || die
+}
+
+src_install() {
+	dobin piler
+}