diff options
| author |   Samuli Suominen <ssuominen@gentoo.org> | 2009-09-04 09:22:53 +0000 |
|---|---|---|
| committer | Samuli Suominen <ssuominen@gentoo.org> | 2009-09-04 09:22:53 +0000 |
| commit | f9d3136b29a528088c446132d05adb4fdb8ef49a (patch) | |
| tree | 290ad066b1ae7105b343127a7b7fca2a864337f7 /sci-biology/seaview | |
| parent | Fix building with GLIBC 2.10+ wrt #281130 by Christoph Brill. (diff) | |
| download | historical-f9d3136b29a528088c446132d05adb4fdb8ef49a.tar.gz historical-f9d3136b29a528088c446132d05adb4fdb8ef49a.tar.bz2 historical-f9d3136b29a528088c446132d05adb4fdb8ef49a.zip | |
Fix building with GLIBC 2.10+ wrt #282431.
Package-Manager: portage-2.2_rc40/cvs/Linux x86_64
Diffstat (limited to 'sci-biology/seaview')
| -rw-r--r-- | sci-biology/seaview/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/seaview/Manifest | 15 | ||||
| -rw-r--r-- | sci-biology/seaview/files/seaview-20071113-glibc-2.10.patch | 12 | ||||
| -rw-r--r-- | sci-biology/seaview/seaview-20071113.ebuild | 11 |
4 files changed, 27 insertions, 19 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog index 50e0f90d518f..7e0d3dc774cd 100644 --- a/sci-biology/seaview/ChangeLog +++ b/sci-biology/seaview/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-biology/seaview -# Copyright 2000-2009 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.27 2009/03/24 21:06:07 ribosome Exp $ +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.28 2009/09/04 09:22:53 ssuominen Exp $ + + 04 Sep 2009; Samuli Suominen <ssuominen@gentoo.org> + seaview-20071113.ebuild, +files/seaview-20071113-glibc-2.10.patch: + Fix building with GLIBC 2.10+ wrt #282431. 24 Mar 2009; Olivier Fisette <ribosome@gentoo.org> metadata.xml: Giving up maintainership of this package. diff --git a/sci-biology/seaview/Manifest b/sci-biology/seaview/Manifest index 1521021fdc3f..94d10edcfe46 100644 --- a/sci-biology/seaview/Manifest +++ b/sci-biology/seaview/Manifest @@ -1,15 +1,6 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - +AUX seaview-20071113-glibc-2.10.patch 545 RMD160 c8e5f91d20b08a902fc88706a52e6664340f7d1d SHA1 ca1026d79a56ce687bb62237a23a70a9022996ef SHA256 97d670caea6584417851b3da260353043ec73d60349b4a12a2b9fbcbf597f509 AUX seaview.desktop 207 RMD160 d5b4e57a1866d5f2d384ab1f6acf21292061570f SHA1 38b4a0b0055da291020690e9ac1974d7aed94871 SHA256 314a791477d6059888bce45de2627d58d1b8998a25200d6a9eb8f13c759c7b32 DIST seaview-20071113.tar.gz 155890 RMD160 1a0b82137e1546eed7e69392a241e7af0e5c3068 SHA1 0928a9729142ebe0fcc32b612150a09ee663eddf SHA256 93335e7e95255a189a5f89cd8fd40a22e3e096727ab30f31b6383c85854c709f -EBUILD seaview-20071113.ebuild 1471 RMD160 974e0d215bd2296c448fda2985e6e96a6a5fe5bc SHA1 5885e1d6d266988a5164c786caa8e080b74d2127 SHA256 b4201c6569a56660ebc71de92d9f1aabc49c3f4cfb24c8ca9b38d1557f15bce7 -MISC ChangeLog 4695 RMD160 c36c3599b5b8e9164598cc19ed19db9f5b097231 SHA1 13f30ef7f310a195b402251b7b67a060af3f2040 SHA256 957bd85a1ec50d77f47b1169a990e0b02ee24e27e73f8d75474524240ea039b9 +EBUILD seaview-20071113.ebuild 1521 RMD160 c52fc4988bb5ce21cb4b9baed43d214f718b22c9 SHA1 8eba29091fc976d98535368f55db531027ad1334 SHA256 363abe6c74557f3f31f5fba6d336bee045acfa0c8480f48043e592c38f54f76b +MISC ChangeLog 4865 RMD160 992a6f00cf6bf99fcfee06c38dfa14176685e968 SHA1 b5907c477fd3d429fa019e48fb95f44f4c95260a SHA256 f1679b98c8ee3197e61d105f8b0b12af928925062ff097c0faf26e5cb0fbc202 MISC metadata.xml 525 RMD160 a11301291e3b009e5f2abd4cc5c301dfd43a2d64 SHA1 6afb760a8ca9a0d94a444e0afd6cfd412b92657c SHA256 da10bbdcd67ab3cae3b3963a664efb7e2cdbc689fc049d5fd8a24d06e2a4e04d ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.11 (GNU/Linux) - -iEYEARECAAYFAkofafEACgkQ/ejvha5XGaMmGgCgoA9Fot6hhc7xFsVzvrzSwt2v -gO4AoKEZ9lR7T5sxHMdvaPX5N3hFbqum -=wwS3 ------END PGP SIGNATURE----- diff --git a/sci-biology/seaview/files/seaview-20071113-glibc-2.10.patch b/sci-biology/seaview/files/seaview-20071113-glibc-2.10.patch new file mode 100644 index 000000000000..9f64ea23a76b --- /dev/null +++ b/sci-biology/seaview/files/seaview-20071113-glibc-2.10.patch @@ -0,0 +1,12 @@ +diff -ur seaview.orig/seaview.cxx seaview/seaview.cxx +--- seaview.orig/seaview.cxx 2007-10-23 18:11:34.000000000 +0300 ++++ seaview/seaview.cxx 2009-09-04 12:22:13.000000000 +0300 +@@ -3924,7 +3924,7 @@ + if( clipboard_contains_alignment(clipboard) ) { + char **seqs, **seqnames, **comments, *p, *message; + int i, count, num, changedwname = FALSE; +- p = strchr(clipboard, ':') + 1; ++ p = const_cast<char*> (strchr(clipboard, ':') + 1); + count = read_mase_seqs_header(p, &seqs, &seqnames, + &comments, NULL, &message); + if(count == 0) return; diff --git a/sci-biology/seaview/seaview-20071113.ebuild b/sci-biology/seaview/seaview-20071113.ebuild index e8b4170fa7e1..a1be2dd1d340 100644 --- a/sci-biology/seaview/seaview-20071113.ebuild +++ b/sci-biology/seaview/seaview-20071113.ebuild @@ -1,10 +1,9 @@ -# Copyright 1999-2008 Gentoo Foundation +# Copyright 1999-2009 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20071113.ebuild,v 1.4 2008/11/14 19:31:29 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20071113.ebuild,v 1.5 2009/09/04 09:22:53 ssuominen Exp $ -EAPI="1" - -inherit toolchain-funcs multilib +EAPI=1 +inherit eutils toolchain-funcs multilib DESCRIPTION="A graphical multiple sequence alignment editor" HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html" @@ -44,6 +43,8 @@ src_unpack() { -e "s:^#HELP_NOT_IN_PATH:HELP_NOT_IN_PATH:" \ -e "s:bge/mgouy:usr/share:" \ Makefile || die "sed Makefile failed" + + epatch "${FILESDIR}"/${P}-glibc-2.10.patch } src_install() { |