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authorMarkus Dittrich <markusle@gentoo.org>2007-11-24 15:10:05 +0000
committerMarkus Dittrich <markusle@gentoo.org>2007-11-24 15:10:05 +0000
commitd6fccaa63c586aa6cb331a4c9553ae7020131f2c (patch)
treecd09a5e42be96816ddaad4049e6abd2357cff345 /sci-biology/vienna-rna/files
parentStable for HPPA (bug #198845). (diff)
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Version bump (fixes bug #191882).
Package-Manager: portage-2.1.3.19
Diffstat (limited to 'sci-biology/vienna-rna/files')
-rw-r--r--sci-biology/vienna-rna/files/digest-vienna-rna-1.6.53
-rw-r--r--sci-biology/vienna-rna/files/vienna-rna-1.6.5-c-fixes.patch22
2 files changed, 25 insertions, 0 deletions
diff --git a/sci-biology/vienna-rna/files/digest-vienna-rna-1.6.5 b/sci-biology/vienna-rna/files/digest-vienna-rna-1.6.5
new file mode 100644
index 000000000000..480a80483521
--- /dev/null
+++ b/sci-biology/vienna-rna/files/digest-vienna-rna-1.6.5
@@ -0,0 +1,3 @@
+MD5 e03a98e6184a4b17eb071f6f67d7d741 ViennaRNA-1.6.5.tar.gz 1214312
+RMD160 671f9ebd26c1c11db4f19821daea89feac8f2df2 ViennaRNA-1.6.5.tar.gz 1214312
+SHA256 70a7bef5d6e67d31ee88089603c18b95e3a544880cddc56e5a04da28cdaa84b9 ViennaRNA-1.6.5.tar.gz 1214312
diff --git a/sci-biology/vienna-rna/files/vienna-rna-1.6.5-c-fixes.patch b/sci-biology/vienna-rna/files/vienna-rna-1.6.5-c-fixes.patch
new file mode 100644
index 000000000000..0a781667c70b
--- /dev/null
+++ b/sci-biology/vienna-rna/files/vienna-rna-1.6.5-c-fixes.patch
@@ -0,0 +1,22 @@
+diff -Naur ViennaRNA-1.6.5/Cluster/statgeom.c ViennaRNA-1.6.5.new/Cluster/statgeom.c
+--- ViennaRNA-1.6.5/Cluster/statgeom.c 2001-04-05 04:36:41.000000000 -0400
++++ ViennaRNA-1.6.5.new/Cluster/statgeom.c 2007-11-24 08:55:17.000000000 -0500
+@@ -5,6 +5,7 @@
+ */
+
+ #include <stdio.h>
++#include <string.h>
+ #include <strings.h>
+ #include <ctype.h>
+ #include "utils.h"
+diff -Naur ViennaRNA-1.6.5/Readseq/readseq.c ViennaRNA-1.6.5.new/Readseq/readseq.c
+--- ViennaRNA-1.6.5/Readseq/readseq.c 1995-07-12 13:05:58.000000000 -0400
++++ ViennaRNA-1.6.5.new/Readseq/readseq.c 2007-11-24 08:56:16.000000000 -0500
+@@ -173,6 +173,7 @@
+ #include <stdio.h>
+ #include <string.h>
+ #include <ctype.h>
++#include <stdlib.h>
+
+ #include "ureadseq.h"
+