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authorAndrey Kislyuk <weaver@gentoo.org>2011-01-13 19:01:49 +0000
committerAndrey Kislyuk <weaver@gentoo.org>2011-01-13 19:01:49 +0000
commitd64608e49c603830e84696b9bd86344767c5dbc3 (patch)
tree7f1d715925b9a37d0029cdb738f0ca1d4fb0e993 /sci-biology
parentNew license for package sci-biology/unafold (diff)
downloadhistorical-d64608e49c603830e84696b9bd86344767c5dbc3.tar.gz
historical-d64608e49c603830e84696b9bd86344767c5dbc3.tar.bz2
historical-d64608e49c603830e84696b9bd86344767c5dbc3.zip
New package, ebuild written by me
Package-Manager: portage-2.2_rc86/cvs/Linux x86_64
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/unafold/ChangeLog10
-rw-r--r--sci-biology/unafold/Manifest4
-rw-r--r--sci-biology/unafold/metadata.xml9
-rw-r--r--sci-biology/unafold/unafold-3.8.ebuild27
4 files changed, 50 insertions, 0 deletions
diff --git a/sci-biology/unafold/ChangeLog b/sci-biology/unafold/ChangeLog
new file mode 100644
index 000000000000..6880d77ad5a7
--- /dev/null
+++ b/sci-biology/unafold/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-biology/unafold
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/unafold/ChangeLog,v 1.1 2011/01/13 19:01:49 weaver Exp $
+
+*unafold-3.8 (13 Jan 2011)
+
+ 13 Jan 2011; Andrey Kislyuk <weaver@gentoo.org> +unafold-3.8.ebuild,
+ +metadata.xml:
+ New package, ebuild written by me
+
diff --git a/sci-biology/unafold/Manifest b/sci-biology/unafold/Manifest
new file mode 100644
index 000000000000..033d4bde8eed
--- /dev/null
+++ b/sci-biology/unafold/Manifest
@@ -0,0 +1,4 @@
+DIST unafold-3.8.tar.bz2 282418 RMD160 3b41f15ca3b2e6da1c8f47581e11db193f4f6860 SHA1 7dd6b34a75f88a2ab96e34048f0fb3b303fdacc1 SHA256 7552724ce82ad8618167ec0524d8c931ac4383314669322c8424cafc06c2bf38
+EBUILD unafold-3.8.ebuild 613 RMD160 cbfe327d448bd55928fe9d219317a2e702350db9 SHA1 f1209d1980485794c0634429e399afa2a893a45d SHA256 e15ff679ab50256584422f3fe16c2fb2b251638d9faa4dbc961f178365ff13f9
+MISC ChangeLog 364 RMD160 6de0f788a41f1b05e77627b0ead27305ed59bdb3 SHA1 ac14557be5344437d2f01b359dd68087d2ef8b3f SHA256 4a58708c319f86c6a65805af70134bd2552525829ae6e5c296fd13323172b709
+MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
diff --git a/sci-biology/unafold/metadata.xml b/sci-biology/unafold/metadata.xml
new file mode 100644
index 000000000000..3302123e5718
--- /dev/null
+++ b/sci-biology/unafold/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer>
+ <email>weaver@gentoo.org</email>
+ <name>Andrey Kislyuk</name>
+ </maintainer>
+ <herd>sci-biology</herd>
+</pkgmetadata>
diff --git a/sci-biology/unafold/unafold-3.8.ebuild b/sci-biology/unafold/unafold-3.8.ebuild
new file mode 100644
index 000000000000..72454f3c78c4
--- /dev/null
+++ b/sci-biology/unafold/unafold-3.8.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/unafold/unafold-3.8.ebuild,v 1.1 2011/01/13 19:01:49 weaver Exp $
+
+EAPI="3"
+inherit flag-o-matic
+
+DESCRIPTION="Unified Nucleic Acid Folding and hybridization package"
+HOMEPAGE="http://mfold.rna.albany.edu/"
+SRC_URI="http://dinamelt.bioinfo.rpi.edu/download/${P}.tar.bz2"
+
+LICENSE="unafold"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND="${DEPEND}"
+
+src_prepare() {
+ # recommended in README
+ append-flags -O3
+}
+
+src_install() {
+ einstall || die
+}