sci-chemistry/autodock_vina: Drop old fixes problems with boost-1.52, #460264

Package-Manager: portage-2.2.0/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

3 files changed, 18 insertions, 62 deletions

diff --git a/sci-chemistry/autodock_vina/ChangeLog b/sci-chemistry/autodock_vina/ChangeLog
index 111f2e75244f..c44d831c5868 100644
--- a/sci-chemistry/autodock_vina/ChangeLog
+++ b/sci-chemistry/autodock_vina/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-chemistry/autodock_vina
 # Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/autodock_vina/ChangeLog,v 1.10 2013/08/18 13:46:53 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/autodock_vina/ChangeLog,v 1.11 2013/08/19 12:55:11 jlec Exp $
+
+  19 Aug 2013; Justin Lecher <jlec@gentoo.org> -autodock_vina-1.1.1-r1.ebuild:
+  Drop old fixes problems with boost-1.52, #460264
 
   18 Aug 2013; Agostino Sarubbo <ago@gentoo.org> autodock_vina-1.1.2.ebuild:
   Stable for x86, wrt bug #480626
diff --git a/sci-chemistry/autodock_vina/Manifest b/sci-chemistry/autodock_vina/Manifest
index ec737da2417b..ebcb394d0c7e 100644
--- a/sci-chemistry/autodock_vina/Manifest
+++ b/sci-chemistry/autodock_vina/Manifest
@@ -4,26 +4,24 @@ Hash: SHA512
 AUX 1.1.1-gentoo.patch 2377 SHA256 3d6b388b831d1a2eab9025c7881a0bac9b71a8e1a5abbad7a05d4ba4c0fbc6ea SHA512 1af940e21842beb29e50de3e6fe6310cd3daf8dfe104dfcb6bdcb0e5b512c01a378dfa31f77f429637df8849b4b4c08a3eb3374e5398a17fe2ad01cd2941928e WHIRLPOOL 7d983c34006cdff8657e689aa0cc897953fc671fb4f55001c64cb19008e2d8f5d00301e20e1fdfbdbe0d667cb213225c2064666c4ac1706b8fc9a01d3fd1a3b9
 AUX 1.1.2-gentoo.patch 2448 SHA256 41a0f4091be44dc2a59a7f32fedc18fb6e8266740284c756f5b79f39a5080d57 SHA512 d8165d88f3e91064c74f1506a7f58473a74f6ebf993165827694d78170b29227dc378c61a7f096a3c49708b713583aca3d5714827d1fe43a5bb37f3d648d2613 WHIRLPOOL b169152e3e00b479a1cc7ef3dd6bcfa00dd2f9eb2b3f2ec0b584e2d894c515507ae1036fc3c009d2bd6f180afc086f3ffccd9570ffa34383f5846d3fa60a27d4
 AUX autodock_vina-1.1.2-boost-filesystem.patch 2936 SHA256 b7e6304fcee336bccd4f0244a24745f34f3bc7582f9f887fa885af99aa4f0947 SHA512 4226fb0d7196362a02afa4e0b0616146ef816a439dd63e1bffbfef183975fe7e6260318f919e9d9835d2d47973542b5340e93ad35b070467e42c0990f9a635f7 WHIRLPOOL 845159f7ea1caad30926b812867fe9e93377d27d83a486b504bf6d9876e2f13ca48855f803108c41b63da4070ec7ff23a65c64995ced0be8db1aa005c20cfe37
-DIST autodock_vina_1_1_1.tgz 66972 SHA256 f9aaf6b2a322775e1be30f22fb69573418610300c0ab2b9345fd6accc1c1b9fd
 DIST autodock_vina_1_1_2.tgz 67366 SHA256 b86412d316960b1e4e319401719daf57ff009229d91654d623c3cf09339f6776 SHA512 f704af322ebc192117c49d0cf8a3f217105beccb7b47d6361665470894ef7a9f91fc4b5f07cc9aff56e497bfa80953e40e39090c8394a095c61597756e333ae9 WHIRLPOOL b68f3bb81fe957fddb6674f71e0c63d1425eb5b4de0615258545ba8e241b347380c8745ee47bd2ee2257f29916191773440e3dd4e9ce857b83a947074eae8d45
-EBUILD autodock_vina-1.1.1-r1.ebuild 1024 SHA256 28b3d50ee4e87cbd053f9bc34a5be1e162230d648892d4a835047eb45620e4b2 SHA512 09e9cdf921c97bfafadc2df56bd78427ffbef0f45cd74d76365ec016f316839915e96ae6e662514072f26cbd684d2710a4fab36e91be36d47d176dec9d9b1b49 WHIRLPOOL b51d3aae48f358bed57d0387d56de5bdb7eeeeeec0a3688cdcf5582c363b480674c5d7bc2227e02516f868dc0757d38795ad641bd5232fdce17eeb390cf571fa
 EBUILD autodock_vina-1.1.2.ebuild 1049 SHA256 fa670e0d5f28dcbd4923afa623df61edbe6065f9459e449d111ba38ecd0cb5a9 SHA512 9dc4d4db3fa19aa2753929ed1e8814c312b9fd92ab46e3a0940d3aae01316beab852cf838921f81c55b0dc0d062aa16225ed97b662bfa8b3741891019b0f5eca WHIRLPOOL 149adb1ee98e47bae3c3d16a85a88976c362c848c15a09aba98999a399c583b5db460a302d8426be1f0cf12e1dc860038ab549c6865fd76304cb6dcb78d1b46d
-MISC ChangeLog 1782 SHA256 927c2c656f4043ac8dfcfb7b53f7f919f387cbaf1585043dde0e884de9490881 SHA512 d5ccdcf110c24d470f42e02857687eb285ab459f2c509f2eb9897f6551610f48e7edec15f73cf2beb4137c832e4dcc29107aeb76562cea98e516bcc1fcfd9afe WHIRLPOOL 1db0b6d78d4865005535b5afa99da913e2825fde73f692b6fc9642a0a201db508892fb33f5044a06ac8fff077d6db687cd86b1e0778afbace5e75dfa519219ed
+MISC ChangeLog 1914 SHA256 129b9a4a71807910a677edfa70f2bf88f46bd895a185febca45289ec0e9f71e7 SHA512 662b2f5038db3fe01bea84ad8a1ed40c95fbb5e4c28533ef8d665e06efd64f4fe40f0f5d7dc11497799aa72aae5557255b6913b122fbc3c78ab8e5875474de3c WHIRLPOOL 4a26d113831b76b817cf0dd195fbd388e3edf51e177e5e735e7158a7924d0089bf1e1815883a9ddb5c03d81412fe2898cde5e7528456339b6029f4ab3448cc33
 MISC metadata.xml 1197 SHA256 88ad62a6236660e5aad35c7b7cfaa76ddf80970a17b2face938f8b0cb2ecbb80 SHA512 b5f68b4eccc83297be5cfc1d082207603bd7b54713b03e1316117419b17411769140ca6477b97671257a56e9100d1873928f5342db4dedfbaeda8519261b8ffd WHIRLPOOL 7e365b0279b404c6b37c962ffb85f72f569a63a8263dbcc3af607ff080221999dffc9d450e09cf1de2e87730c8ddc610086bc39e50324a25b2b74fd5f9633103
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diff --git a/sci-chemistry/autodock_vina/autodock_vina-1.1.1-r1.ebuild b/sci-chemistry/autodock_vina/autodock_vina-1.1.1-r1.ebuild
deleted file mode 100644
index c1dc92ffeb3c..000000000000
--- a/sci-chemistry/autodock_vina/autodock_vina-1.1.1-r1.ebuild
+++ /dev/null
@@ -1,45 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/autodock_vina/autodock_vina-1.1.1-r1.ebuild,v 1.4 2012/01/28 15:09:39 phajdan.jr Exp $
-
-EAPI="3"
-
-inherit eutils flag-o-matic versionator
-
-MY_P="${PN}_$(replace_all_version_separators _)"
-
-DESCRIPTION="Program for drug discovery, molecular docking and virtual screening"
-HOMEPAGE="http://vina.scripps.edu/"
-SRC_URI="http://vina.scripps.edu/download/${MY_P}.tgz"
-
-SLOT="0"
-KEYWORDS="amd64 x86"
-LICENSE="Apache-2.0"
-IUSE="debug"
-
-RDEPEND="dev-libs/boost"
-DEPEND="${RDEPEND}"
-
-S="${WORKDIR}"/${MY_P}/build/linux/release
-
-src_prepare() {
-	cd "${WORKDIR}"/${MY_P} && epatch "${FILESDIR}"/${PV}-gentoo.patch
-}
-
-src_compile() {
-	local c_options
-
-	use debug || c_options="-DNDEBUG"
-
-	append-cxxflags -DBOOST_FILESYSTEM_VERSION=2
-
-	emake \
-		BASE="${EPREFIX}"/usr/ \
-		GPP="$(tc-getCXX)" \
-		C_OPTIONS="${c_options}" \
-		|| die
-}
-
-src_install() {
-	dobin vina{,_split} || die
-}