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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+ <maintainer>
+ <email>ribosome@gentoo.org</email>
+ <name>Olivier Fisette</name>
+ </maintainer>
+ <herd>sci</herd>
+ <longdescription>
+ The Vienna RNA Package consists of a C code library and several
+ stand-alone programs for the prediction and comparison of RNA secondary
+ structures. RNA secondary structure prediction through energy
+ minimization is the most used function in the package. We provide three
+ kinds of dynamic programming algorithms for structure prediction: the
+ minimum free energy algorithm of (Zuker and Stiegler 1981) which yields a
+ single optimal structure, the partition function algorithm of
+ (McCaskill 1990) which calculates base pair probabilities in the
+ thermodynamic ensemble, and the suboptimal folding algorithm of
+ (Wuchty et.al 1999) which generates all suboptimal structures within a
+ given energy range of the optimal energy. For secondary structure
+ comparison, the package contains several measures of distance
+ (dissimilarities) using either string alignment or tree-editing
+ (Shapiro and Zhang 1990). Finally, we provide an algorithm to design
+ sequences with a predefined structure (inverse folding).
+ </longdescription>
+</pkgmetadata>