diff options
author | Pacho Ramos <pacho@gentoo.org> | 2016-10-01 10:00:27 +0200 |
---|---|---|
committer | Pacho Ramos <pacho@gentoo.org> | 2016-10-01 10:02:02 +0200 |
commit | 755e2e74b59343ea17fa6b7582ced53cd83dfd0f (patch) | |
tree | e9b2954a209e84f61273cbfc9f4cb26e00a65cf5 /sci-physics | |
parent | package.mask: remove some masked for removal packages (diff) | |
download | gentoo-755e2e74b59343ea17fa6b7582ced53cd83dfd0f.tar.gz gentoo-755e2e74b59343ea17fa6b7582ced53cd83dfd0f.tar.bz2 gentoo-755e2e74b59343ea17fa6b7582ced53cd83dfd0f.zip |
package.mask: remove some masked for removal packages
Diffstat (limited to 'sci-physics')
-rw-r--r-- | sci-physics/mpb/Manifest | 1 | ||||
-rw-r--r-- | sci-physics/mpb/files/mpb-1.4.2-autotools.patch | 262 | ||||
-rw-r--r-- | sci-physics/mpb/files/mpb-1.4.2-guile18.patch | 12 | ||||
-rw-r--r-- | sci-physics/mpb/files/mpb-1.4.2-headers.patch | 11 | ||||
-rw-r--r-- | sci-physics/mpb/metadata.xml | 23 | ||||
-rw-r--r-- | sci-physics/mpb/mpb-1.4.2-r2.ebuild | 127 |
6 files changed, 0 insertions, 436 deletions
diff --git a/sci-physics/mpb/Manifest b/sci-physics/mpb/Manifest deleted file mode 100644 index 5f52a99d8cbd..000000000000 --- a/sci-physics/mpb/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST mpb-1.4.2.tar.gz 686488 SHA256 e44c0720a5969a879fb93e48f6098d4d87e2f99d6ef49711d822f4c2249ccd61 SHA512 4151612b8868b324353556f46aeccdce2726d8938ab8cf7404c36da68e90ec0de1799d4e23b2d5bbe5853d0c0329ba0ee1a2fdb2745aed43c34759084b62fbac WHIRLPOOL e0b256c06bdd2c7479723c0db6c434e645b6fbf1a052ebc2971203902f9bf09336b4bf69ec8c8f1cd9b4952672a28290b4ff66c44f56feae135d9cbf07284473 diff --git a/sci-physics/mpb/files/mpb-1.4.2-autotools.patch b/sci-physics/mpb/files/mpb-1.4.2-autotools.patch deleted file mode 100644 index b6faf07d2bcf..000000000000 --- a/sci-physics/mpb/files/mpb-1.4.2-autotools.patch +++ /dev/null @@ -1,262 +0,0 @@ -diff -Nur mpb-1.4.2.orig/configure.ac mpb-1.4.2/configure.ac ---- mpb-1.4.2.orig/configure.ac 2003-03-04 02:38:41.000000000 +0000 -+++ mpb-1.4.2/configure.ac 2008-11-25 17:31:12.000000000 +0000 -@@ -6,15 +6,8 @@ - MPB_VERSION=1.4.2 - AC_SUBST(MPB_VERSION) - --AC_MSG_CHECKING([for vendor f77 to be used instead of g77]) --AC_MSG_RESULT() --AC_CHECK_PROGS(F77, f77 xlf77 cf77 fort77 f90 xlf90) - AC_PROG_F77 -- --# Get C compiler. --AC_MSG_CHECKING([for vendor cc to be used instead of gcc]) --AC_MSG_RESULT() --AC_CHECK_PROGS(CC, cc xlc) # prefer vendor cc, to stay in sync with Fortran -+AC_F77_WRAPPERS - AC_PROG_CC - - # Checks for programs. -@@ -79,12 +72,6 @@ - echo "*********************** HERMITIAN EPS. ***********************" - fi - --# Add lots of compiler warnings to check for if we are using gcc: --# (The variable $GCC is set to "yes" by AC_PROG_CC if we are using gcc.) --if test "$GCC" = "yes"; then -- CFLAGS="$CFLAGS -Wall -W -Wbad-function-cast -Wcast-qual -Wpointer-arith -Wcast-align -pedantic" --fi -- - ############################################################################## - # Checks for libraries: - ############################################################################## -@@ -203,6 +190,10 @@ - # how to run mpb-mpi in general - fi - -+# Checks for header files. -+AC_HEADER_STDC -+AC_CHECK_HEADERS(unistd.h getopt.h) -+ - ############################################################################## - # Check for HDF5 library - AC_ARG_WITH(hdf5, [AC_HELP_STRING([--without-hdf5],[do not use HDF5 output])], ok=$withval, ok=yes) -@@ -349,9 +340,7 @@ - ]], [AC_MSG_RESULT(ok)], [AC_MSG_ERROR([libctl version ${LIBCTL_MAJOR}.${LIBCTL_MINOR}.${LIBCTL_BUGFIX} or later is required])]) - - ############################################################################## --# Checks for header files. --AC_HEADER_STDC --AC_CHECK_HEADERS(unistd.h getopt.h) -+ - - # Checks for typedefs, structures, and compiler characteristics. - AC_C_CONST -diff -Nur mpb-1.4.2.orig/Makefile.in mpb-1.4.2/Makefile.in ---- mpb-1.4.2.orig/Makefile.in 2002-01-18 22:52:41.000000000 +0000 -+++ mpb-1.4.2/Makefile.in 2008-11-25 17:31:12.000000000 +0000 -@@ -2,6 +2,9 @@ - - SHELL = @SHELL@ - -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ - CC = @CC@ - CFLAGS = @CFLAGS@ - CPPFLAGS = @CPPFLAGS@ -diff -Nur mpb-1.4.2.orig/mpb-ctl/Makefile.in mpb-1.4.2/mpb-ctl/Makefile.in ---- mpb-1.4.2.orig/mpb-ctl/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/mpb-ctl/Makefile.in 2008-11-25 18:23:20.000000000 +0000 -@@ -13,6 +13,12 @@ - - SHELL = @SHELL@ - -+mandir = @mandir@ -+ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ - ############################################################################## - - # Makefile.in for programs using libctl (assumes that autoconf is -@@ -37,8 +43,8 @@ - ../src/util/util.a - - MY_LDFLAGS = # extra -L flags go here --MY_CPPFLAGS = -I. -I../src/util -I../src/matrices -I../src/matrixio \ -- -I../src/maxwell -+MY_CPPFLAGS = -I$(srcdir) -I$(top_srcdir)/src/util -I$(top_srcdir)/src/matrices -I$(top_srcdir)/src/matrixio \ -+ -I$(top_srcdir)/src/maxwell - MY_DEFS = -DHAVE_CTL_HOOKS=1 -DHAVE_CTL_EXPORT_HOOK=1 - - # The following variables should be detected and set by autoconf: -@@ -134,11 +140,11 @@ - - install-mpb: $(PROGRAM_NAME) - $(INSTALL) -d $(prefix)/bin -- $(INSTALL) -m 0755 -s .$(PROGRAM_NAME) $(prefix)/bin/`echo $(PROGRAM_NAME)|sed '$(transform)'` -+ $(INSTALL) -m 0755 .$(PROGRAM_NAME) $(prefix)/bin/`echo $(PROGRAM_NAME)|sed '$(transform)'` - $(INSTALL) -d $(prefix)/share/libctl/specs - $(INSTALL) -m 0644 $(SPECIFICATION_FILE) $(prefix)/share/libctl/specs - $(INSTALL) -d $(mandir)/man1 -- $(INSTALL) -m 0644 $(PROGRAM_NAME).1 $(mandir)/man1 -+ $(INSTALL) -m 0644 $(srcdir)/$(PROGRAM_NAME).1 $(mandir)/man1 - - mpb-split-tmp: - rm -f mpb-split-tmp -@@ -149,7 +155,7 @@ - mpb_name=`echo mpb | sed '$(transform)'`; \ - $(INSTALL) -m 0755 mpb-split-tmp $(prefix)/bin/$${mpb_name}-split - $(INSTALL) -d $(mandir)/man1 -- $(INSTALL) -m 0644 mpb-split.1 $(mandir)/man1 -+ $(INSTALL) -m 0644 $(srcdir)/mpb-split.1 $(mandir)/man1 - - clean: - rm -f $(ALL_OBJECTS) ctl-io.c ctl-io.h main.c geom.c \ -diff -Nur mpb-1.4.2.orig/src/matrices/Makefile.in mpb-1.4.2/src/matrices/Makefile.in ---- mpb-1.4.2.orig/src/matrices/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/src/matrices/Makefile.in 2008-11-25 17:31:12.000000000 +0000 -@@ -2,9 +2,11 @@ - - SHELL = @SHELL@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I../util -I. @CPPFLAGS@ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ -+CPPFLAGS = -I$(top_srcdir)/src/util -I$(srcdir) -I. @CPPFLAGS@ - DEFS = @DEFS@ - LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -diff -Nur mpb-1.4.2.orig/src/matrixio/Makefile.in mpb-1.4.2/src/matrixio/Makefile.in ---- mpb-1.4.2.orig/src/matrixio/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/src/matrixio/Makefile.in 2008-11-25 17:31:12.000000000 +0000 -@@ -2,9 +2,11 @@ - - SHELL = @SHELL@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I../util -I../matrices -I. @CPPFLAGS@ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ -+CPPFLAGS = -I$(top_srcdir)/src/util -I$(top_srcdir)/src/matrices -I$(srcdir) -I. @CPPFLAGS@ - DEFS = @DEFS@ - LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -diff -Nur mpb-1.4.2.orig/src/maxwell/Makefile.in mpb-1.4.2/src/maxwell/Makefile.in ---- mpb-1.4.2.orig/src/maxwell/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/src/maxwell/Makefile.in 2008-11-25 17:31:12.000000000 +0000 -@@ -2,9 +2,11 @@ - - SHELL = @SHELL@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I../util -I../matrices @CPPFLAGS@ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ -+CPPFLAGS = -I$(top_srcdir)/src/util -I$(top_srcdir)/src/matrices -I. @CPPFLAGS@ - DEFS = @DEFS@ - LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -diff -Nur mpb-1.4.2.orig/src/util/Makefile.in mpb-1.4.2/src/util/Makefile.in ---- mpb-1.4.2.orig/src/util/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/src/util/Makefile.in 2008-11-25 17:31:12.000000000 +0000 -@@ -2,9 +2,11 @@ - - SHELL = @SHELL@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I. @CPPFLAGS@ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ -+CPPFLAGS = -I$(top_srcdir) -I. @CPPFLAGS@ - DEFS = @DEFS@ - LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -diff -Nur mpb-1.4.2.orig/tests/Makefile.in mpb-1.4.2/tests/Makefile.in ---- mpb-1.4.2.orig/tests/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/tests/Makefile.in 2008-11-25 17:31:58.000000000 +0000 -@@ -2,12 +2,14 @@ - - SHELL = @SHELL@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I../src/util -I../src/matrices -I../src/maxwell @CPPFLAGS@ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ -+ -+CPPFLAGS = -I$(top_srcdir)/src/util -I$(top_srcdir)/src/matrices -I$(top_srcdir)/src/maxwell -I. @CPPFLAGS@ - DEFS = @DEFS@ --LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -+LDFLAGS = @LDFLAGS@ - RANLIB = @RANLIB@ - @SET_MAKE@ - -@@ -15,11 +17,11 @@ - ../src/matrices/matrices.a \ - ../src/util/util.a - --all: blastest eigs_test maxwell_test malloctest normal_vectors -+all: - - libs: - --check: all -+check: blastest eigs_test maxwell_test malloctest normal_vectors - rm -f blastest.out.test - ./blastest | sed 's/\-0\.000\([ ,)]\)/ 0.000\1/g' | sed 's/\-0\.000$$/ 0.000/g' > blastest.out.test - diff blastest.@SCALAR_TYPE@.out blastest.out.test -diff -Nur mpb-1.4.2.orig/utils/Makefile.in mpb-1.4.2/utils/Makefile.in ---- mpb-1.4.2.orig/utils/Makefile.in 2002-09-14 23:20:55.000000000 +0100 -+++ mpb-1.4.2/utils/Makefile.in 2008-11-25 18:23:46.000000000 +0000 -@@ -1,13 +1,16 @@ - # Variables substituted by the autoconf configure script: - - SHELL = @SHELL@ -+mandir = @mandir@ -+ -+srcdir = @srcdir@ -+top_srcdir = @top_srcdir@ -+VPATH = @srcdir@ - --CC = @CC@ --CFLAGS = @CFLAGS@ --CPPFLAGS = -I../src/util -I../src/matrices -I../src/matrixio @CPPFLAGS@ -+CPPFLAGS = -I$(top_srcdir)/src/util -I$(top_srcdir)/src/matrices -I$(top_srcdir)/src/matrixio -I. @CPPFLAGS@ - DEFS = @DEFS@ -DMPB_VERSION='"'"@MPB_VERSION@"'"' --LDFLAGS = @LDFLAGS@ - LIBS = @LIBS@ -+LDFLAGS=@LDFLAGS@ - RANLIB = @RANLIB@ - @SET_MAKE@ - -@@ -36,9 +39,9 @@ - - install-mpb-data: mpb-data - $(INSTALL) -d $(prefix)/bin -- $(INSTALL) -m 0755 -s mpb-data $(prefix)/bin/`echo mpb-data|sed '$(transform)'` -+ $(INSTALL) -m 0755 mpb-data $(prefix)/bin/`echo mpb-data|sed '$(transform)'` - $(INSTALL) -d $(mandir)/man1 -- $(INSTALL) -m 0644 mpb-data.1 $(mandir)/man1 -+ $(INSTALL) -m 0644 $(srcdir)/mpb-data.1 $(mandir)/man1 - - clean: - rm -f mpb-data mpb-data.o core diff --git a/sci-physics/mpb/files/mpb-1.4.2-guile18.patch b/sci-physics/mpb/files/mpb-1.4.2-guile18.patch deleted file mode 100644 index 9cb73a099b8b..000000000000 --- a/sci-physics/mpb/files/mpb-1.4.2-guile18.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -Nur mpb-1.4.2.orig/mpb-ctl/field-smob.c mpb-1.4.2/mpb-ctl/field-smob.c ---- mpb-1.4.2.orig/mpb-ctl/field-smob.c 2012-08-07 20:56:24.538452994 -0700 -+++ mpb-1.4.2/mpb-ctl/field-smob.c 2012-08-07 20:56:43.713557380 -0700 -@@ -157,7 +157,7 @@ - boolean cur_fieldp(SCM obj) - { - if (SCM_NIMP(obj) && SCM_SYMBOLP(obj)) { -- char *s = gh_symbol2newstr(obj, NULL); -+ char *s = gh_symbol2newstr(obj); - int ret = !strcmp(s, "cur-field"); - free(s); - return ret; diff --git a/sci-physics/mpb/files/mpb-1.4.2-headers.patch b/sci-physics/mpb/files/mpb-1.4.2-headers.patch deleted file mode 100644 index 937e5fc373d4..000000000000 --- a/sci-physics/mpb/files/mpb-1.4.2-headers.patch +++ /dev/null @@ -1,11 +0,0 @@ -diff -Nur mpb-1.4.2.orig/mpb-ctl/matrix-smob.c mpb-1.4.2/mpb-ctl/matrix-smob.c ---- mpb-1.4.2.orig/mpb-ctl/matrix-smob.c 2002-09-13 19:27:35.000000000 +0100 -+++ mpb-1.4.2/mpb-ctl/matrix-smob.c 2008-11-25 18:20:11.000000000 +0000 -@@ -17,6 +17,7 @@ - - #include <stdio.h> - #include <stdlib.h> -+#include <math.h> - - #include "../src/config.h" - diff --git a/sci-physics/mpb/metadata.xml b/sci-physics/mpb/metadata.xml deleted file mode 100644 index 706eced531c0..000000000000 --- a/sci-physics/mpb/metadata.xml +++ /dev/null @@ -1,23 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="project"> - <email>sci-physics@gentoo.org</email> - <name>Gentoo Physics Project</name> - </maintainer> - <longdescription lang="en"> - The MIT Photonic-Bands (MPB) package is a program for computing - the band structures (dispersion relations) and electromagnetic modes of - periodic dielectric structures, on both serial and parallel computers. It was - developed by Steven G. Johnson at MIT in the Joannopoulos Ab Initio Physics - group. - This program computes definite-frequency eigenstates of Maxwell's - equations in periodic dielectric structures for arbitrary wavevectors, using - fully-vectorial and three-dimensional methods. It is especially - designed for the study of photonic crystals (a.k.a. photonic - band-gap materials), but is also applicable to many other problems - in optics, such as waveguides and resonator systems. - (For example, it can solve for the modes of waveguides with arbitrary - cross-sections.) -</longdescription> -</pkgmetadata> diff --git a/sci-physics/mpb/mpb-1.4.2-r2.ebuild b/sci-physics/mpb/mpb-1.4.2-r2.ebuild deleted file mode 100644 index 7eb255b57e63..000000000000 --- a/sci-physics/mpb/mpb-1.4.2-r2.ebuild +++ /dev/null @@ -1,127 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=4 - -inherit eutils autotools flag-o-matic toolchain-funcs - -DESCRIPTION="Photonic band structure program" -SRC_URI="http://ab-initio.mit.edu/mpb/${P}.tar.gz" -HOMEPAGE="http://ab-initio.mit.edu/mpb/" - -LICENSE="GPL-2" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" -IUSE="doc examples hdf5 mpi" - -SLOT="0" - -RDEPEND="virtual/lapack - dev-scheme/guile - sci-libs/libctl - sci-libs/fftw:2.1[mpi?] - sys-libs/readline - hdf5? ( sci-libs/hdf5 ) - mpi? ( virtual/mpi )" - -DEPEND="${RDEPEND} - virtual/pkgconfig" - -src_prepare() { - epatch \ - "${FILESDIR}"/${P}-autotools.patch \ - "${FILESDIR}"/${P}-guile18.patch \ - "${FILESDIR}"/${P}-headers.patch - cd "${S}" - eautoreconf - # version with inversion symmetry (mpbi). - cp -r "${S}" "${S}_inv" || die - # version with hermitian eps (mpbh). - cp -r "${S}" "${S}_herm" || die - # mpi versions (mpb-mpi). - if use mpi; then - cp -r "${S}" "${S}_mpi" || die - cp -r "${S}" "${S}_inv_mpi" || die - cp -r "${S}" "${S}_herm_mpi" || die - fi - tc-export CC -} - -src_configure() { - # enable legacy API for hdf-1.8 - use hdf5 && append-cflags -DH5_USE_16_API - # - local myconf=( - --with-libctl="${EPREFIX}/usr/share/libctl" - --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" - --with-lapack="$($(tc-getPKG_CONFIG) --libs lapack)" - $(use_with hdf5) - ) - - econf "${myconf[@]}" - - cd "${S}_inv" - econf "${myconf[@]}" \ - --with-inv-symmetry - - cd "${S}_herm" - econf "${myconf[@]}" \ - --with-hermitian-eps - - if use mpi; then - cd "${S}_mpi" - econf "${myconf[@]}" \ - --with-mpi - cd "${S}_inv_mpi" - econf "${myconf[@]}" \ - --with-inv-symmetry \ - --with-mpi - cd "${S}_herm_mpi" - econf "${myconf[@]}" \ - --with-hermitian-eps \ - --with-mpi \ - CC=mpicc - fi -} - -src_compile() { - local d - for d in . _inv _herm; do - cd "${S}${d}" - emake -C mpb-ctl ctl-io.c - emake - done - if use mpi; then - for d in . _inv _herm; do - cd "${S}${d}_mpi" - emake -C mpb-ctl ctl-io.c CC=mpicc - emake CC=mpicc LD=mpicc - done - fi -} - -src_install() { - einstall - dodoc README NEWS AUTHORS COPYRIGHT ChangeLog TODO - use doc && dohtml doc/* - if use examples; then - insinto /usr/share/doc/${PF} - doins -r mpb-ctl/examples - fi - - newbin "${S}_inv"/mpb-ctl/.mpb mpbi - newbin "${S}_herm"/mpb-ctl/.mpb mpbh - - einfo "Several versions of mpb have been installed:" - einfo "mpb : regular version" - einfo "mpbi: configured for inversion symmetry" - einfo "mpbh: configured for hermitian epsilon" - if use mpi; then - newbin "${S}_mpi"/mpb-ctl/.mpb mpb-mpi - newbin "${S}_inv_mpi"/mpb-ctl/.mpb mpbh-mpi - newbin "${S}_herm_mpi"/mpb-ctl/.mpb mpbi-mpi - einfo "mpb-mpi : regular version with mpi" - einfo "mpbi-mpi: configured for inversion symmetry with mpi" - einfo "mpbh-mpi: configured for hermitian epsilon with mpi" - fi -} |