blob: fd2fc4b43f3917f051ca2fcf47a2ca5489e84158 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
|
# Copyright 1999-2024 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=8
# deal.II uses its own FindLAPACK.cmake file that calls into the system
# FindLAPACK.cmake module and does additional internal setup. Do not remove
# any of these modules:
CMAKE_REMOVE_MODULES_LIST=""
inherit cmake flag-o-matic verify-sig
DESCRIPTION="Solving partial differential equations with the finite element method"
HOMEPAGE="https://www.dealii.org/"
if [[ ${PV} = *9999* ]]; then
inherit git-r3
EGIT_REPO_URI="https://github.com/dealii/dealii.git"
SRC_URI=""
else
DOC_PV=9.4.1
SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz
verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${PV}/${P}.tar.gz.asc )
doc? (
https://github.com/${PN}/${PN}/releases/download/v${DOC_PV}/${PN}-${DOC_PV}-offline_documentation.tar.gz
verify-sig? ( https://github.com/${PN}/${PN}/releases/download/v${DOC_PV}/${PN}-${DOC_PV}-offline_documentation.tar.gz.asc )
)"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
fi
LICENSE="LGPL-2.1+"
SLOT="0"
IUSE="
adolc arborx assimp arpack cgal cpu_flags_x86_avx cpu_flags_x86_avx512f
cpu_flags_x86_sse2 cuda +debug doc +examples ginkgo gmsh +gsl hdf5
+lapack metis mpi muparser opencascade p4est petsc scalapack slepc
+sparse static-libs sundials symengine trilinos
"
# TODO: add slepc use flag once slepc is packaged for gentoo-science
REQUIRED_USE="
arborx? ( trilinos )
p4est? ( mpi )
slepc? ( petsc )
trilinos? ( mpi )"
RDEPEND="dev-libs/boost:=
app-arch/bzip2
sys-libs/zlib
dev-cpp/tbb:=
arborx? ( sci-libs/arborx[mpi=] )
adolc? ( sci-libs/adolc )
arpack? ( sci-libs/arpack[mpi=] )
assimp? ( media-libs/assimp:= )
cuda? ( dev-util/nvidia-cuda-toolkit )
ginkgo? ( sci-libs/ginkgo )
gmsh? ( sci-libs/gmsh )
gsl? ( sci-libs/gsl:= )
hdf5? ( sci-libs/hdf5[mpi=] )
lapack? ( virtual/lapack )
metis? (
>=sci-libs/metis-5
mpi? ( >=sci-libs/parmetis-4 )
)
mpi? ( virtual/mpi[cxx] )
muparser? ( dev-cpp/muParser )
opencascade? ( sci-libs/opencascade:= )
p4est? ( sci-libs/p4est[mpi] )
petsc? ( sci-mathematics/petsc[mpi=] )
scalapack? ( sci-libs/scalapack )
slepc? ( sci-mathematics/slepc[mpi=] )
sparse? ( sci-libs/umfpack )
sundials? ( sci-libs/sundials:= )
symengine? ( >=sci-libs/symengine-0.4:= )
trilinos? ( sci-libs/trilinos )"
DEPEND="${RDEPEND}
virtual/pkgconfig
doc? ( app-text/doxygen[dot] dev-lang/perl )"
BDEPEND="
verify-sig? ( sec-keys/openpgp-keys-dealii )"
PATCHES=(
"${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch
"${FILESDIR}"/${PN}-9.4.2-base-mpi.cc-remove-superfluous-explicit-instantiatio.patch
"${FILESDIR}"/${PN}-9.4.2-base-mpi.h-mark-a-template-variable-to-have-const-in.patch
)
VERIFY_SIG_OPENPGP_KEY_PATH="/usr/share/openpgp-keys/dealii.asc"
src_configure() {
# deal.II needs a custom build type:
local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release)
local mycmakeargs=(
-DDEAL_II_PACKAGE_VERSION="${PV}"
-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF
-DDEAL_II_ALLOW_AUTODETECTION=OFF
-DDEAL_II_ALLOW_BUNDLED=OFF
-DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF
-DDEAL_II_COMPILE_EXAMPLES=OFF
-DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html"
-DDEAL_II_DOCREADME_RELDIR="share/doc/${P}"
-DDEAL_II_COMPILE_EXAMPLES=OFF
-DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples"
-DDEAL_II_LIBRARY_RELDIR="$(get_libdir)"
-DDEAL_II_SHARE_RELDIR="share/${PN}"
-DDEAL_II_WITH_ZLIB=ON
-DDEAL_II_WITH_ADOLC="$(usex adolc)"
-DDEAL_II_WITH_ARBORX="$(usex arborx)"
-DDEAL_II_WITH_ASSIMP="$(usex assimp)"
-DDEAL_II_WITH_ARPACK="$(usex arpack)"
-DDEAL_II_WITH_CGAL="$(usex cgal)"
-DDEAL_II_WITH_CUDA="$(usex cuda)"
-DDEAL_II_WITH_GINKGO="$(usex ginkgo)"
-DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)"
-DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)"
-DDEAL_II_WITH_GMSH="$(usex gmsh)"
-DDEAL_II_WITH_GSL="$(usex gsl)"
-DDEAL_II_WITH_HDF5="$(usex hdf5)"
-DDEAL_II_WITH_KOKKOS="$(usex trilinos)"
-DDEAL_II_WITH_LAPACK="$(usex lapack)"
-DDEAL_II_WITH_METIS="$(usex metis)"
-DDEAL_II_WITH_MPI="$(usex mpi)"
-DDEAL_II_WITH_MUPARSER="$(usex muparser)"
-DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)"
-DDEAL_II_WITH_P4EST="$(usex p4est)"
-DDEAL_II_WITH_PETSC="$(usex petsc)"
-DDEAL_II_WITH_SCALAPACK="$(usex scalapack)"
-DDEAL_II_WITH_SLEPC="$(usex slepc)"
-DDEAL_II_WITH_SUNDIALS="$(usex sundials)"
-DDEAL_II_WITH_SYMENGINE="$(usex symengine)"
-DDEAL_II_WITH_UMFPACK="$(usex sparse)"
-DBUILD_SHARED_LIBS="$(usex !static-libs)"
-DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)"
-DDEAL_II_WITH_TBB=ON
-DDEAL_II_WITH_TASKFLOW=OFF
-DDEAL_II_WITH_TRILINOS="$(usex trilinos)"
)
use opencascade && mycmakeargs+=(
-DCMAKE_PREFIX_PATH="/usr/$(get_libdir)/opencascade"
)
# Do a little dance for purely cosmetic QA reasons. The build system
# does query for the highest instruction set first and skips the other
# variables if a "higher" variant is set
if use cpu_flags_x86_avx512f; then
mycmakeargs+=( -DDEAL_II_HAVE_AVX512=yes )
append-cxxflags "-mavx512f"
elif use cpu_flags_x86_avx; then
mycmakeargs+=( -DDEAL_II_HAVE_AVX=yes )
append-cxxflags "-mavx2"
elif use cpu_flags_x86_avx; then
mycmakeargs+=( -DDEAL_II_HAVE_SSE2=yes )
append-cxxflags "-msse2"
fi
# Unconditionally enable strict C++17 standard. This is necessary for
# USE=cgal and USE=kokkos and safe to set for all presently supported
# compilers
append-cxxflags "-std=c++17"
cmake_src_configure
}
src_install() {
if use doc && [[ ${PV} != *9999* ]]; then
# copy missing images to the build directory:
cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \
"${BUILD_DIR}"/doc/doxygen/deal.II || die
# replace links:
sed -i \
's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \
"${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed"
fi
cmake_src_install
# decompress the installed example sources:
use examples && docompress -x /usr/share/doc/${PF}/examples
}
|
GitWeb